Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0695 ATGTGGAGGAACAATAGTATGGATATTTTCTCAACATCTGAACGTGAAGATGATGAAGACGCACTTAAATGGGCTGCTATTGAGAGATTACCGACCTATTTAAGGATTAGAAGAAGCATAATCAATGATGAAGAAGGTGAAGGGAGAGAGATTGATATCAAAAAGCTTGGATTGACTGAGAGAAAGGTTTTGTTAGAGAGACTTGTGAAGATTGCTGAGGAAGATAATGAAAAGTTCTTGTTGAAACTCAAGGAAAGAATGGATAGAGTTGGAATTGATATTCCAACAGTTGAAGTGAGATTTGAGCATGTGAATGTTGAAGCACAGGTTTATGTTGGAGGAAGAGCTTTACCTTCATTGTTCAACTTCTTTGTTAATGGCTTAGAGGGATTTTTGAATTATCTTCATGTTATTCCAAGTCCAAAGAAATCATTGCATATTCTTCAAAATGTTAGTGGAATCATAAAGCCTCAAAGAATGACATTACTTTTGGGGCCACCAGGCTCTGGAAAAACCACTTTGCTTTTGGCCTTGGCTGGAAAACTTGCTAAAGAATTGAAAAATTCTGGGAGAGTAACATACAATGGGAAAGGGCTAGAAGAGTTTGTGCCACAAAGAACATCAGCTTATATAAGTCAACATGATAATCACATTGGAGAAATGACTGTTAGAGAAACCCTAGCTTTCTCAGCAAGGTGTCAAGGGGTTGGACACAATTATGATATGTTGACTGAACTACTAAGAAGAGAGAAAGAAGCAAAGATTAAACCAGATCCCGATATTGATGCTTATATGAAGGCAGCAGCACTAGAAGGGCAACAGGCGAGCGTGGTGACCGACTATATTCTCAAGATTTTGGGACTTGAAATATGTGCTGATATTATGGTAGGAGATGGAATGATAAGAGGTATCTCAGGAGGACAGAAAAAGAGAGTTACAACAGGTGAGATGCTGGTTGGACCTATAAGAGTGTTGTTCATGGATGAGATTTCGACTGGTTTGGACAGTTCAACAACTTTTCAAATAATCAGCTCGATCAGACAATCGATCCATATTCTGAACGGAACGGCACTCGTGTCACTTCTACAGCCAGCACCGGAAACTTATGAATTATTCGATGATATCATACTTCTCACAGATGGACAAATTGTGTATCAAGGACCAAGAGAGAATGTACTTGAGTTCTTCGAATCAATGGGATTCAAGTGTCCCGAGAGAAAAGGCATCGCGGATTTCTTACAAGAGGTGACATCAAGAAAAGATCAATGGCAATATTGGGCGAATAAAGACGAACCGTATAGTTTTGTTACTGTCAAGGATTTTGCCGAAGCCTTTCAGATATTTCACATAGGTCAAAAACTCGGCGATGAAATAGCTAATCCTTTTGACAAATCTAAATGCCATGAAAATATCTTGACTACAAAGAAATATGGTGTTAACATGAAGGAGCTGTTGAAGGCTTGTGCTAGCAGAGAGTTTTTGCTTATGAAGCGAAATTCGTTTGTCCATATATTCAAAGTCACTCAACTTATTTATTTAGCAATCATGACAACAACATTGTTTCTAAAAACTAAGATGCATAAGGATACAGTGGAAGATGGAGGAACATACATGGGAGCACTATTCTTTACGGTGCTAGTAGCGATGTTCAATGGAATATCCGAGCTAAATATGACTATCATGAAACTTCCTGTCTTTTATAAACAAAGAGATCTTCTTTTCTATCCTTCTTGGGCTTATTCTCTTCCACCATGGATCCTCAAAATACCAATAACTCTCATAGAAGTTGCTATTTGGGAAGCCATCACTTACTACGCCGTCGGCTATGATCCAAGTTTTCTAAGGCTTTTAAAACAGTACTTGATATTACTATGCATTAACCAGATGGCATCTTCACTATTTCGGTTAATGGCAGCATTAGGAAGGAATGTTATAGTTGCAAACACTGTTGGGTCATTTGCATTACTAGTAGTTATGGTTTTGGGAGGATTTGTGATTTCAAGAGAGGATGTGCACAAATGGTTTCTTTGGGGTTATTGGTCGTCGCCATTGATGTATGGACAGAATGCTATAGCAGTGAATGAATTTCTTGGACATAGTTGGAGAAAGGTTACTCAAAATTCCAATGAAACATTGGGAGTTTTGACAATGAAAACTCGCGGTTTTTTCCCGCAAGCTTATTGGTATTGGATTGGTGTAGGAGCATTGATTGGTTATGTTTTTCTGTTTAATATTCTATTCACCTTGGCTTTAAAATATCTCAGCCCCTTCAGAAAGGATCAAGCAGGACTATCCGAGGAGGAGTTGCTAGAGAGAGATGTTTCAGTAATAGCTGAAGAGTTTACACAGTTACCGACTCGAAAGAGAATTTCTGAAACAAAGATGGCAGAAGAAGAACTTATGCCATCCGCGTCTTTTTCTGCAAGAGTTGATAATGGTAAAGCTAGTAGAAGTGGAAGGAGAGGCATGGTTCTTCCTTTTCAACCTCTATCCCTCACTTTTGATGAGATCAGATATGCTGTAGACATGCCACAGGAAATGAAGAGTCAAGGAGTTTTCGAGGATCGTCTCGAACTTTTGAAAGGTATCACTGGTGCCTTTAGGCCTGGAGTACTAACAGCTTTGATGGGAGTAAGTGGTGCCGGAAAGACTACTCTAATGGATGTTTTGGCCGGAAGGAAAACCGGTGGATATATTGAAGGAAACATCACAATATCTGGTTATCCAAAGAATCAAAAAACATTTGCTCGCATATCAGGATATTGCGAACAATTTGATATCCACTCACCTAATGTTACAGTTTATGAATCTTTGCTATATTCAGCATGGCTTCGTTTACCACCTGAAGTTAATCAAGCTACTAGAAAGATGTTTATTGAAGAAGTTATGGAGCTTGTAGAGCTTAACTCATTAAGAGAAGCACTAGTTGGATTGCCAGGCGAGAATGGACTTTCAACCGAACAACGCAAAAGACTTACAATTGCGGTTGAGCTTGTAGCCAATCCATCGATAATATTCATGGACGAACCAACCTCTGGCCTTGATGCTAGAGCAGCTGCTATTGTAATGAGAACAGTGAGGAACACCGTGGACACAGGACGTACCGTAGTTTGCACGATCCATCAGCCAAGTATAGACATTTTCGACGCCTTTGATGAGCTTCTACTTATGAAATTGGGAGGTGAGCAAATATACGCCGGTCCATTAGGCCGCCACTGTTCTCATTTGATTCAGTACTTTGAGGCTATTCAAGGAGTTCCTAAGATCAAAGATGGTTATAATCCTGCAACATGGATGTTGGAAGTTACATCAGCAGGATCAGAAGCAAATCTTAAGGTCAACTTCACTAATGTCTACAGAAACTCGGAACTATACCGGCGAAACAAACAATTGATCCAGGAATTAAGTATACCTCCTCAAGGTTCAAAGGATTTATACTTCGATACTCAATATACGCAAACTATGCTGTCACAATGTAAGGCTTGTCTATGGAAACAACACTTATCGTATTGGCGAAACACGTCCTATACAGCGGTTAGACTGTTGTTTACAACACTAATAGCATTCTTGTTTGGAATCATATTTTGGAACATTGGCTTGAAAAGGAGAAAGGAGCAAGATCTTTTCAATGCAATGGGATCAATGTATTCTTCTGTTATATTTATAGGAGTACAAAATGGTGCCTCAGTTCAGCCTGTAATAGCAGTTGAGAGAACAGTCTTTTATAGAGAAAGAGCTGCTGGAATGTATTCTGCTTTGCCTTATGCTCTAGCACAGGTTATTATAGAGCTTCCCCACATCTTGGCTCAGACCCTGATATATGGGATCATTGTATATGCTATGATGGGATTTGAATGGACAGCATCAAAATTCTTGTGGTATATTTTCTTCAATTACTTCACTTTCTTGTACTACACCTTCTATGGTATGATGACCATGGCCATCAGTCCCAACCAACATGTTGCTGCCATAATGTCCACTTCATTCTATGCAATATGGAACCTTTTCTCTGGCTTTATCATTCCCTTATCTAGAATACCAATATGGTGGAAATGGTACTATTGGGTTTGCCCTGTTGCATGGACCTTATATGGACTGTTGGCCTCTCAATATGGAGACAACATGGACAAACTTGAGAATGGTCAAAGGGTTGAAGAATTTGTGAGCAATTACTTTGGTTTTGAACATGATTTTCTAGGAGTGGTTGCAATTGTTGTGGCTGGTTTCTCAGTGTTGTTTGCACTTATCTTCACCTTTGGTATCAAAGCATTCAACTTTCAAAAAAGATGA 4290 0.3921 MWRNNSMDIFSTSEREDDEDALKWAAIERLPTYLRIRRSIINDEEGEGREIDIKKLGLTERKVLLERLVKIAEEDNEKFLLKLKERMDRVGIDIPTVEVRFEHVNVEAQVYVGGRALPSLFNFFVNGLEGFLNYLHVIPSPKKSLHILQNVSGIIKPQRMTLLLGPPGSGKTTLLLALAGKLAKELKNSGRVTYNGKGLEEFVPQRTSAYISQHDNHIGEMTVRETLAFSARCQGVGHNYDMLTELLRREKEAKIKPDPDIDAYMKAAALEGQQASVVTDYILKILGLEICADIMVGDGMIRGISGGQKKRVTTGEMLVGPIRVLFMDEISTGLDSSTTFQIISSIRQSIHILNGTALVSLLQPAPETYELFDDIILLTDGQIVYQGPRENVLEFFESMGFKCPERKGIADFLQEVTSRKDQWQYWANKDEPYSFVTVKDFAEAFQIFHIGQKLGDEIANPFDKSKCHENILTTKKYGVNMKELLKACASREFLLMKRNSFVHIFKVTQLIYLAIMTTTLFLKTKMHKDTVEDGGTYMGALFFTVLVAMFNGISELNMTIMKLPVFYKQRDLLFYPSWAYSLPPWILKIPITLIEVAIWEAITYYAVGYDPSFLRLLKQYLILLCINQMASSLFRLMAALGRNVIVANTVGSFALLVVMVLGGFVISREDVHKWFLWGYWSSPLMYGQNAIAVNEFLGHSWRKVTQNSNETLGVLTMKTRGFFPQAYWYWIGVGALIGYVFLFNILFTLALKYLSPFRKDQAGLSEEELLERDVSVIAEEFTQLPTRKRISETKMAEEELMPSASFSARVDNGKASRSGRRGMVLPFQPLSLTFDEIRYAVDMPQEMKSQGVFEDRLELLKGITGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGNITISGYPKNQKTFARISGYCEQFDIHSPNVTVYESLLYSAWLRLPPEVNQATRKMFIEEVMELVELNSLREALVGLPGENGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKLGGEQIYAGPLGRHCSHLIQYFEAIQGVPKIKDGYNPATWMLEVTSAGSEANLKVNFTNVYRNSELYRRNKQLIQELSIPPQGSKDLYFDTQYTQTMLSQCKACLWKQHLSYWRNTSYTAVRLLFTTLIAFLFGIIFWNIGLKRRKEQDLFNAMGSMYSSVIFIGVQNGASVQPVIAVERTVFYRERAAGMYSALPYALAQVIIELPHILAQTLIYGIIVYAMMGFEWTASKFLWYIFFNYFTFLYYTFYGMMTMAISPNQHVAAIMSTSFYAIWNLFSGFIIPLSRIPIWWKWYYWVCPVAWTLYGLLASQYGDNMDKLENGQRVEEFVSNYFGFEHDFLGVVAIVVAGFSVLFALIFTFGIKAFNFQKR* 1430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0695 1429 Pfam ABC-2 type transporter 1158 1371 IPR013525 GO:0016020|GO:0140359
Psa6g0695 1429 Pfam ABC-2 type transporter 484 696 IPR013525 GO:0016020|GO:0140359
Psa6g0695 1429 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 1429 - -
Psa6g0695 1429 Gene3D - 135 439 IPR027417 -
Psa6g0695 1429 PANTHER ABC-2 AND PLANT PDR ABC-TYPE TRANSPORTER FAMILY PROTEIN 1 1429 - -
Psa6g0695 1429 CDD ABCG_PDR_domain2 829 1067 IPR034003 -
Psa6g0695 1429 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 832 1084 IPR003439 GO:0005524
Psa6g0695 1429 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 132 405 IPR003439 GO:0005524
Psa6g0695 1429 Pfam Plant PDR ABC transporter associated 701 762 IPR013581 -
Psa6g0695 1429 Pfam ABC-2 type transporter 363 414 IPR043926 GO:0140359
Psa6g0695 1429 Gene3D - 848 1081 IPR027417 -
Psa6g0695 1429 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 405 IPR027417 -
Psa6g0695 1429 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 855 1069 IPR027417 -
Psa6g0695 1429 SMART AAA_5 157 382 IPR003593 -
Psa6g0695 1429 SMART AAA_5 869 1061 IPR003593 -
Psa6g0695 1429 Pfam ABC-transporter N-terminal 72 123 IPR029481 -
Psa6g0695 1429 Pfam ABC transporter 860 1012 IPR003439 GO:0005524
Psa6g0695 1429 Pfam ABC transporter 148 330 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0695 Psa-Chr6 23609178 23616155 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0695 857 1044 Calmodulin-binding Proteins AT2G36910 25.510 5.05e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0695 K08711 - gmx:100810505 2531.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0631 5 50251672 50259071 Psa6g0695 6 23609178 23616155 PCT