Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0689 ATGAAGATATTTCAATCAGAGTCTGATCATAACTACGAGCAACCCGGTCACATCAACGAACACGGTTACAGCCAATGCAGTCTCACCGGAATCATTCTTCCGTCTCTCGGCGCCACCAGCGTTTACGACAGCAACGCGAACGACCTCGGTTATTTCATCATCTCCCCATACAACAAGCGTTATGAAAATTGGAACAAGTTTCTCACAATATGGGTTTTCTACACTGCAATTATGTGTCCTTTTGAATTTGGGTTTCTTTTGACTTCAAAAGGCCCACTTGCAATAGTAGACAATGTTGTGAATGTATTTTTCTTAATTGACATTGTTCTCACATTCTTTGTTGCATATGTTGAGAAAATGACTTACCTTCTCGTCGTTGATAAAAGGAAAATTGCTCATAGATATCTTAGATCATGGTTCTTCTTAGATGTCCTGTCTACCATACCTTATGAGGTTTTTCATTTTCTGTTGCCGCCTTTTCTCCGGACCTATGGTTACTTCAATATTCTTCGCCTTTGGCGCCTTCGTAGAGCGAGTGCTATGTTTCAAAGGTTAGAAAAGAATAAGCGATATAACTACTTTTTTGTGCGCTGTACAAAACTTATTTGTGTAACCCTATTTGCGACGCATGTAGCCGCTTGTGTTTTCTATTTTCTTGCTACAAGACCTAACCATAAAAAAGTTACATGGCTATCACTTGTCTCGAATGGTTCTAGCCTAACTATGTTTGACGGTTATGTTATATCAGTATATTGGTCCTTAGTGACACTTTCATCAGTTGGTTATGGAGATTTTCACCCCATAAACTCAGATGAAATGAGTTTTTGCATTTTATTTGTGATTTTCAATTTTGGACTTACTGCATATCTGATAGGAAATATGACCAACTTGGTTGTTCACTGGACTGATAGAACTAAGACATATAGAGATACTGTTCAAGCTGCATCATATTTTGCTCGTAGAAATCGGTTACCTGAACGTTTGCAAGAACAGATATATGCCCATTTTCATATGAAGTACAAAACAAATATAGAAGGACTGGAGCAGCAAGAGATAATTGATTCACTTCCAAAAGCCATTCAGTCGAGCATCGCACACTACCGATTCTTTGAACTTATTAAACAGGTTTACTTGTTTAATGGAGTGTCAAGGGACCTACTATATCAATTGGTGACAGAGTTAAAGGCCGAGTTTTTTCCGCCAAAAGAAGATGTAATCTTACAGAATGAAACACCAACAGACTTTTATATAGTGGTTTTTGGAGCCGTTGATCTTATCGTTCACGAGAAATCAATGGATCGGACAATTGACCACGCATATACAGGAGATGTTTTTGGAGAAATAGGAGTGTTATGTTATAGGCCCCAAATTTTTACAGTTCGCACCAAGCGGTTTAGCCAGATCTTGCGTTTGAGTCGATCAACATTTCTAAACCTTGTTCATAACAATGTTGGAGATGGAGCAATAATCATGAACAATTTTCTCAATCATGTGCAAAAATCAAAATTTGGAATGTTGGATGGAGTTATGACTGAAATAGAGACACTGTTGGCAAGAGGAAAAATGGATCTGCCTATAAGTTTAATATTTGCAGCTCAAAAAGGTGATGATATAATGTTGCATGAATTACTGAAGAAAGGATCAGATCCAAATGAAATAGATAATAAAACTGGAAAGACAGCACTGCATACGGCAGCTTCTAAAGGTAGTGACCATTGTGCGGTTTTGCTTCTAGAGTTTGGTGCTGATCCTAACATAAAAGATTTTGATGGAAATATACCACTAGGGGAAGCAATTTTGGGTAACCATGAATCAGTGACAAAACTACTTGTAGAGAATGGTGCAGATATATCTTTAGCGGATGTAGGTCGTTTAGCATGTTATGCTGTTGAGAAAAAGGACATAGAATTGCTCAAAGATATTGCTCAATATGGTGGTGATGTGAAAAAGTCCTCAAATGGAACCACTGCGCTTCATCTTGCTGTAGGTCAAGGAAATGTTGAAATGGTTAAGTTTCTTGTAGAACAAGGAGCATATATTGATCTGCAAGATAGTTTTGGTTGGTCTGCAAGAGCTTATGCAGATCATCAATGTCATGAAGAAATACAAAATATCTTTAAAGAAATTGAAAAAGATGACAAAGTTCCCCATGTTATTTCTCCGGTGCCAAATAATAACGAAGGATCTTGTATTGAAAAGTGTCAAAGTGAATCTTATCTACCAACTATTCCTCAAAGTGGTAGCTTGCCACCTAATCAAGAGTTGACATGGTTGGATAATCATCATGGAAGGGTTACCCCTTTTCGAAATTCCTTTTTCGGAATGGTTTCAGTTCCTAGTCAAGATAAAATTGATTCTCCTACATCGGAAAATAGTCGCACTACAACTACTCCTACTCCAAGTGTGACTGAATTACCAACTAGAGTAATGATTAGTTGTCAAGGAAAAAGTGAATATCCTAAACGGCTTGTTTTTCTACCTAAATCCCTTCAAGAGTTGCTACATATTGGTGCTGAAAAGTTTAACTACTCTCCAACTAAAATTTTGACTGAAGATGGAGCTGAAGTTGAAGACATATGTTTGATAAGAGAGGGTGATCATCTCACTCTTGTATGA 2616 0.3754 MKIFQSESDHNYEQPGHINEHGYSQCSLTGIILPSLGATSVYDSNANDLGYFIISPYNKRYENWNKFLTIWVFYTAIMCPFEFGFLLTSKGPLAIVDNVVNVFFLIDIVLTFFVAYVEKMTYLLVVDKRKIAHRYLRSWFFLDVLSTIPYEVFHFLLPPFLRTYGYFNILRLWRLRRASAMFQRLEKNKRYNYFFVRCTKLICVTLFATHVAACVFYFLATRPNHKKVTWLSLVSNGSSLTMFDGYVISVYWSLVTLSSVGYGDFHPINSDEMSFCILFVIFNFGLTAYLIGNMTNLVVHWTDRTKTYRDTVQAASYFARRNRLPERLQEQIYAHFHMKYKTNIEGLEQQEIIDSLPKAIQSSIAHYRFFELIKQVYLFNGVSRDLLYQLVTELKAEFFPPKEDVILQNETPTDFYIVVFGAVDLIVHEKSMDRTIDHAYTGDVFGEIGVLCYRPQIFTVRTKRFSQILRLSRSTFLNLVHNNVGDGAIIMNNFLNHVQKSKFGMLDGVMTEIETLLARGKMDLPISLIFAAQKGDDIMLHELLKKGSDPNEIDNKTGKTALHTAASKGSDHCAVLLLEFGADPNIKDFDGNIPLGEAILGNHESVTKLLVENGADISLADVGRLACYAVEKKDIELLKDIAQYGGDVKKSSNGTTALHLAVGQGNVEMVKFLVEQGAYIDLQDSFGWSARAYADHQCHEEIQNIFKEIEKDDKVPHVISPVPNNNEGSCIEKCQSESYLPTIPQSGSLPPNQELTWLDNHHGRVTPFRNSFFGMVSVPSQDKIDSPTSENSRTTTTPTPSVTELPTRVMISCQGKSEYPKRLVFLPKSLQELLHIGAEKFNYSPTKILTEDGAEVEDICLIREGDHLTLV* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0689 871 ProSiteProfiles Ankyrin repeat profile. 590 622 IPR002110 GO:0005515
Psa6g0689 871 Pfam Ion transport protein 63 305 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Psa6g0689 871 ProSiteProfiles Ankyrin repeat region circular profile. 590 621 - -
Psa6g0689 871 SUPERFAMILY Voltage-gated potassium channels 56 299 - -
Psa6g0689 871 ProSiteProfiles Ankyrin repeat region circular profile. 557 588 - -
Psa6g0689 871 SMART cnmp_10 378 495 IPR000595 -
Psa6g0689 871 PRINTS Ankyrin repeat signature 558 573 IPR002110 GO:0005515
Psa6g0689 871 PRINTS Ankyrin repeat signature 606 620 IPR002110 GO:0005515
Psa6g0689 871 PANTHER POTASSIUM CHANNEL AKT1 22 870 IPR045319 GO:0005249|GO:0006813
Psa6g0689 871 SUPERFAMILY cAMP-binding domain-like 303 496 IPR018490 -
Psa6g0689 871 Gene3D Helix hairpin bin 304 367 - -
Psa6g0689 871 CDD CAP_ED 378 491 IPR000595 -
Psa6g0689 871 ProSiteProfiles Ankyrin repeat profile. 653 685 IPR002110 GO:0005515
Psa6g0689 871 ProSiteProfiles Ankyrin repeat region circular profile. 653 684 - -
Psa6g0689 871 MobiDBLite consensus disorder prediction 781 801 - -
Psa6g0689 871 Pfam Cyclic nucleotide-binding domain 398 483 IPR000595 -
Psa6g0689 871 Pfam Ankyrin repeats (3 copies) 628 702 IPR002110 GO:0005515
Psa6g0689 871 Pfam Ankyrin repeats (3 copies) 528 621 IPR002110 GO:0005515
Psa6g0689 871 PRINTS EAG/ELK/ERG potassium channel family signature 74 81 IPR003938 GO:0005249|GO:0006813|GO:0016020
Psa6g0689 871 PRINTS EAG/ELK/ERG potassium channel family signature 97 107 IPR003938 GO:0005249|GO:0006813|GO:0016020
Psa6g0689 871 PRINTS EAG/ELK/ERG potassium channel family signature 108 117 IPR003938 GO:0005249|GO:0006813|GO:0016020
Psa6g0689 871 PRINTS EAG/ELK/ERG potassium channel family signature 246 263 IPR003938 GO:0005249|GO:0006813|GO:0016020
Psa6g0689 871 PRINTS EAG/ELK/ERG potassium channel family signature 290 299 IPR003938 GO:0005249|GO:0006813|GO:0016020
Psa6g0689 871 ProSiteProfiles cAMP/cGMP binding motif profile. 378 497 IPR000595 -
Psa6g0689 871 Gene3D - 60 299 - -
Psa6g0689 871 ProSiteProfiles Ankyrin repeat profile. 557 589 IPR002110 GO:0005515
Psa6g0689 871 Pfam KHA, dimerisation domain of potassium ion channel 808 869 IPR021789 -
Psa6g0689 871 Gene3D - 524 708 IPR036770 -
Psa6g0689 871 Gene3D Jelly Rolls 368 506 IPR014710 -
Psa6g0689 871 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 22 870 - -
Psa6g0689 871 SMART ANK_2a 590 619 IPR002110 GO:0005515
Psa6g0689 871 SMART ANK_2a 557 586 IPR002110 GO:0005515
Psa6g0689 871 SMART ANK_2a 829 858 IPR002110 GO:0005515
Psa6g0689 871 SMART ANK_2a 653 682 IPR002110 GO:0005515
Psa6g0689 871 SMART ANK_2a 523 552 IPR002110 GO:0005515
Psa6g0689 871 SUPERFAMILY Ankyrin repeat 527 709 IPR036770 -
Psa6g0689 871 ProSiteProfiles KHA domain profile. 808 871 IPR021789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0689 Psa-Chr6 23316828 23322849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0689 17 870 Ion Channels AT2G25600 52.037 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0689 K21867 - gmx:100808832 1055.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0689 6 23316828 23322849 Psa6g0689 6 23316828 23322849 ECH