Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0683 ATGGCTAAGAAGAAGAACCCTATGGTGTTTATGGATGTGTCTATAGATGGGGATCCTGCTGAAAGAATGGTTTTTGAGCTTTTCCATGACGTTGCTCCAAAGACTGCTGAAAATTTCCGTGCACTGTGTACCGGAGAAAGAGGAGTCAGTCCTAATACTGGAAAATCACTGCACTACAAGGGTTCTTTTTTCCATCAAATCATAAAAGGCTCCATTGTGAAGGGTGGTGATTTTATCAATCGAAATGGGACTGGTGGAGAAAGCATTTACCCCAAGTTCCCAGATGAGTCTCCTAAGCTAAAGCATGATTCTCTAGGCCTTCTATCCATGGCAATTGCTGATCGTGACACTCTTGGTTCACATTTTATCATCACTTTGAAAGCTGATCACCATCTGGATAGGAAGCATGTAGCTTTTGGCAAACTTGTGCAAGGGTATGATGTATTGAAGAAAATTGAAGATGTGGGTGATGAAGAAGGACTCCCATCCGTAACTGTTAAAATAGTTAATAGTGGTGAACATAATGAGGATGGTAAGAAGACTCACAAGTCAAAAATTGGAAGGAATGGATCTACTGAAGCCATTAGTCATGAAGTGCGGAGGAAGGGAAAACATAGAAAGTCTTCAGGAGACAGAAGGAAAAAGAGAAAACATTACTCATCAGAATCAGATAGTTCCTCAGATTCAGACACAGAATCTTCAGAAAGTGACACTGACTCTGACTCGGATTTGTCCTCTTCATCTTACACTAGCTCTTCTAGTGATGATAGGCGAAGGAAGAGAAAGAGATCCAGGAAAGATAAACATAGACATGGAAAAAGAAGAGATAAACGCCGAGAAAAGAAGCGAAGGAAACTAGATAAGCGATCAAAACGTAAATCAAAGAGGGAGTCAGACAGTCAAACTGATACAGATAGTGCAAGAAAGAGTACCGATAGCTCCAATGGCCTAGGTCTTGATACTCAAGGGAAAATTCAAAAGCATGAAGATCATGCTCAGAGAAATGCCGAAGTCCAGTCATCCTCAGTTTTGGAGAAAGAATCATCTCCTATGAATCTTAAAAAGAGGGAGGGGCTGAGCAATGTAGAGGATGGAGAATTCCCAAAGGAAAATGGAGCGCAGCGTAGCAACGGCATTGGGGCCACCCATAGATCTGACAGATACGAAGAGAGGCAGCCTGACGTGATGGATGATAATCCAGGAAAATCTAGGAGTCGAAGCATGAGTCCTAAGCAAACCGTGAGCAAGAGTATGAGTATTAGTCCCAAGCGTGGGAGCAAAATCCCAAGCATTAGTCCAAAAGAGAGGTTGATCAGAAGTCCAAGTGGTAGTAGAAGCCCTCATGCTCCGTCACAGAGGAGTTTGAGCAGGAGTCCTGTTAGAAGCATCAGCAGAAGCCCTGTGAGAGGGAGGAAGGGGAGAAGTATCAGTAGAAGCCCTATGATAACACACATTCATAGAATTGTTAGCAAGAGCCCTGTGAGAAGTCCTGACCGCAGAAGTTTTAGCAAGAGCCCTGTGAGATCTGTTTCTCAAAGTCGTAGGAGCAGGAGTTCTGCTAGAGTATCAACACGAAGAACAGTCAGTAGGAGTCCTGTGAGAGTATCAAGAAAGAGCTTCAGCAGAAGTCCAATTAGATCATCTGCCAGAAGTCTCAGCAGAAGTTCTGGCCGAGCTCCTTTGAGAAGCATTAGCCGAAGTCCTGTTAGATTGGCAGGGAGAGGCAATCACCGCAGCTATTCCAGGAGTCGTAGCCCTGTCCGTAGGGCAAGGACACCACAAGAGAGGAGTCTGTCAAGGAGTGTGTCACCTGATGCTTCACCAAAACGTATCAGGAGAGGAAGGGGTTTCAGTGAACGATACTCTTATGCTAGAAGGTACAGAACCCCCTCCCGGTCTCCTGTCAGGTACCGCTCCCGGTCTCCTGTCAGGTACCGCTCCCGGTCTCCTGTCAGATACCGCTATAACGGAAGGAATGATCGTGACAGATATTCTGGATACAGAAGGTACTCCCCAAGGCGTAATAGGAGCCCGCTGCCACGGAGAAGAACTCCACCAAGGTACCGAAGTAGGAGAAGCAGGACACCATCTGTATCATGCAGCCCACCTCACCGTTCTCGACGGTATAGCCCAAGCCGTAGCCCGGTTCGCCATCGCTCACCTCCTCGTGTGAATAGGCGCATGTCATCATCCCTTAGCAGGAGTCCATCTCGATCCAGGTCTTCTGTGGAATCACAGTCTCCAAGGAAAGCAAGCAAAGATAACAGGTCAAGGTCTTCTTCTAGAAGCTCAGATGGAGGGAAAGGCTTGGTGTCTTATGGAAATGGCTCTCCTGATTCAAGCCAAAAGTGA 2352 0.4617 MAKKKNPMVFMDVSIDGDPAERMVFELFHDVAPKTAENFRALCTGERGVSPNTGKSLHYKGSFFHQIIKGSIVKGGDFINRNGTGGESIYPKFPDESPKLKHDSLGLLSMAIADRDTLGSHFIITLKADHHLDRKHVAFGKLVQGYDVLKKIEDVGDEEGLPSVTVKIVNSGEHNEDGKKTHKSKIGRNGSTEAISHEVRRKGKHRKSSGDRRKKRKHYSSESDSSSDSDTESSESDTDSDSDLSSSSYTSSSSDDRRRKRKRSRKDKHRHGKRRDKRREKKRRKLDKRSKRKSKRESDSQTDTDSARKSTDSSNGLGLDTQGKIQKHEDHAQRNAEVQSSSVLEKESSPMNLKKREGLSNVEDGEFPKENGAQRSNGIGATHRSDRYEERQPDVMDDNPGKSRSRSMSPKQTVSKSMSISPKRGSKIPSISPKERLIRSPSGSRSPHAPSQRSLSRSPVRSISRSPVRGRKGRSISRSPMITHIHRIVSKSPVRSPDRRSFSKSPVRSVSQSRRSRSSARVSTRRTVSRSPVRVSRKSFSRSPIRSSARSLSRSSGRAPLRSISRSPVRLAGRGNHRSYSRSRSPVRRARTPQERSLSRSVSPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRYRSRSPVRYRSRSPVRYRYNGRNDRDRYSGYRRYSPRRNRSPLPRRRTPPRYRSRRSRTPSVSCSPPHRSRRYSPSRSPVRHRSPPRVNRRMSSSLSRSPSRSRSSVESQSPRKASKDNRSRSSSRSSDGGKGLVSYGNGSPDSSQK* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0683 783 MobiDBLite consensus disorder prediction 606 626 - -
Psa6g0683 783 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Psa6g0683 783 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Psa6g0683 783 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 106 121 IPR002130 GO:0000413|GO:0003755
Psa6g0683 783 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 133 IPR002130 GO:0000413|GO:0003755
Psa6g0683 783 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 134 149 IPR002130 GO:0000413|GO:0003755
Psa6g0683 783 SUPERFAMILY Cyclophilin-like 4 175 IPR029000 -
Psa6g0683 783 MobiDBLite consensus disorder prediction 503 562 - -
Psa6g0683 783 MobiDBLite consensus disorder prediction 402 426 - -
Psa6g0683 783 MobiDBLite consensus disorder prediction 258 291 - -
Psa6g0683 783 MobiDBLite consensus disorder prediction 168 783 - -
Psa6g0683 783 MobiDBLite consensus disorder prediction 710 724 - -
Psa6g0683 783 MobiDBLite consensus disorder prediction 762 783 - -
Psa6g0683 783 MobiDBLite consensus disorder prediction 725 746 - -
Psa6g0683 783 MobiDBLite consensus disorder prediction 200 214 - -
Psa6g0683 783 MobiDBLite consensus disorder prediction 747 761 - -
Psa6g0683 783 MobiDBLite consensus disorder prediction 172 187 - -
Psa6g0683 783 MobiDBLite consensus disorder prediction 653 669 - -
Psa6g0683 783 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP95 1 472 - -
Psa6g0683 783 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 173 IPR002130 GO:0000413|GO:0003755
Psa6g0683 783 MobiDBLite consensus disorder prediction 674 690 - -
Psa6g0683 783 MobiDBLite consensus disorder prediction 349 370 - -
Psa6g0683 783 Gene3D - 1 174 IPR029000 -
Psa6g0683 783 MobiDBLite consensus disorder prediction 307 321 - -
Psa6g0683 783 MobiDBLite consensus disorder prediction 382 401 - -
Psa6g0683 783 MobiDBLite consensus disorder prediction 691 708 - -
Psa6g0683 783 MobiDBLite consensus disorder prediction 292 306 - -
Psa6g0683 783 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 472 - -
Psa6g0683 783 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 171 IPR002130 GO:0000413|GO:0003755
Psa6g0683 783 MobiDBLite consensus disorder prediction 444 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0683 Psa-Chr6 23169891 23177690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0683 25 171 U-box Gene Family AT5G67530 39.333 9.44e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0683 K09566 - jre:109001815 561.607