Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0667 ATGAATGTTAATGACATTGTTATGTTTAAATATAACAATGAAACTAAGAGGATGAAAACAATTGCAGTGATGACTGAGACATGTCATTCATATATTACTCATCCTCTTACACAACCTAACATTATTGAGGAACCTATACTTTCACTAGAATACCCAAGTCTCACATTGTTTAAAGATGTTTTGGATGAAGGAGTCAACTTGAATGAGGTCTCCACCATGTTTGAAAATATTGTGGGTGAAGGATACAACTTGGATAAAGGGACAACTGTGGTGGAAGAGAATGTGGGTGATGAGGAGGCCATTGTGGTTAAAGTGAATGTGGGTTATGAGGGGATCATTGATATGGAAGAGAATGTGGGCGATGAGAGGGCCAGTGTGGTTGAAGTGAATTGGATCTCACCTGGATTTGGAGGCTCACAGATGAATTGGATTGATAAGAATGGAAAGTTTCTTGTCTCCAACAAAAAACTATTCGGTTTTGGCTTTGTCACATCTTCACACAACAACACATTGTTTCAACTTGCAATAGTCCACATGGATAGCACCACAATCATTTGGACTGCAAATAGAGAATCTCCTGTTTCAAGTTCTGATAAATTTGTGTTTGATGAAAAGGGTAATGTTTTTTTACAAAAAGGAAGAGTTTTGATTTGGTCAACAAACACAAGTGACATGAAGGTTTCATCAATGGAGTTACAAGACAGTGGAAATTTGGTTTTGCTTGGAAATGATGACAGTGATGTGATTTGGCAAAGCTTTGATCATCCAACAGATACTTTGTTGCCAATGCAAAACTTCACCAAGGGAATGAGACTTATCAGTGAACATGATTCTTCTAACAATTTGACTTATGTGCTTGAAATTGAATCTCATTCTGGTAATGTTGTTCTCTCCACAGGCTTACATTCTCCACAAAGCTATTGGTCTATGCAGAAAGATATCCGACGGATCGTCAATGAAAAAGGCGACGATGTTGCTTTTGCAACTCTTGATAGAAATTCATGGAAGTTCTATGATAATAAGAGATCTTTGTTGTGGCAATTTATCATTGCTGCTGATGATGATGATTCAAATGCAACATGGATTGCGGTTTTGGGAAGTGATGGAATTATTACTTTCATGAATCTTCAAAAGAAAGACTCAATTGCTTCATCAAGAAGAATACCGCAAGATTCTTGTAGTACACCACAGCCTTGTGATTCTTACAATATATGCTTTGGTGACAGAAAATGTAGTTGTCCTTCTGTTCTTAGCGTTAGGCCTAGTTGCGAACCGGGTTTTGTTTCGCCTTGTAACTCGAAAAATTCTATTGAGTTAATGAAAGGTGATGATGGACTTAGTTGCTTTGCACTTGAATTTCTTCAACCTTCTTTGAAAACCGATTTGATCGGTTGCAAGAATTCTTGTAGTGAAAATTGTTCATGTCTTGCTATGTTCTTTCATGAGAGTTCAGTTTCGAGAGACAGAAACACGGACATAAACACAGACACTACTGGAGCGAGTGGAGACAATAATACTCAAACAATAGTTGTTGTGATCATTGTGATATTAACATTGTTTGTCATTTCTGGTATGATCTATGTGGGACTAAAATACATGAAGAAAAAGGAAAATTTGTCTGAGTCTCCAGTCGAGAATTCAGACGACGACGACGGTTTCTTGGAGAGTTTAACTAGTATGCCAATCCGTTTCAGCTACAACGATCTAGAAACCGCGACGAATAACTTCGCGGTGAAGTTAGGTCAAGGTGGTTTCGGCTCGGTTTATAAGGGAATTCTACAAGATGGAACACAGATAGCTGTGAAAAAGTTAGAAGGAATAGGTCAAGGGAAGAAAGAATTTAGAGTTGAAGTTAGCATTATTGGAAGCATTCATCATCATCATTTGGTAAGGCTTAAAGGGTTTTGTGCTGAAGGATCTCATAAACTTCTTGTTTATGAGTATATGGAAAATGGTTCATTGGATAAATGGATATTCAAAAAGAATAAAAGTGAACAATCTTTGGATTGGAACACAAGGTACAACATCGCACTAGGAACAGCTAAAGGACTAGCTTATCTACATGAAGATTGTGATTCAAAGATTGTTCATTGTGATATCAAACCAGAAAATGTGCTTTTAGATAGTAACTTTGAAGCCAAAGTATCCGATTTCGGTCTCGCGAAGCTCATGAACCGCGAACAAAGCCATGTTTTCACAACAATGAGAGGAACAAGAGGGTACTTAGCACCAGAATGGATCACAAACTATGCTATATCAGAGAAAAGTGATGTTTATAGCTATGGAATGGTGCTGTTAGAAATTATAGGTGGAAGGAAAAACTATGATGCTAATGAGAATTCGGAGAAATCGCATTTTCCTTCTTTCGCTTATAAGATGATGGAACAAGGGAAGGTGGAGGATCTGGTTGATCCTGAGGTGAAAATGGTTGAAAATGATGTGAGAGTTGAGATTGGTTTGAATGTTGCATTTTTGTGTATACAAGAAGACATGAGTTTGAGACCTTCTATGAATAAAGTAGTGCAAATGCTTGAAGGTTTATGTGATGTTCCTAAGGTAGCAAAAGGTTCACCATTGGGTTCTAAGTTTTATTTGAATTTGCTTAGACCTACAAGTGAGAGTGGCACTTCTTCAGAACCATTAGAGGGGTATAGTGATGCATATCTCTCTGCTGTTAGACTTTCAGGACCAAGATAA 2697 0.3756 MNVNDIVMFKYNNETKRMKTIAVMTETCHSYITHPLTQPNIIEEPILSLEYPSLTLFKDVLDEGVNLNEVSTMFENIVGEGYNLDKGTTVVEENVGDEEAIVVKVNVGYEGIIDMEENVGDERASVVEVNWISPGFGGSQMNWIDKNGKFLVSNKKLFGFGFVTSSHNNTLFQLAIVHMDSTTIIWTANRESPVSSSDKFVFDEKGNVFLQKGRVLIWSTNTSDMKVSSMELQDSGNLVLLGNDDSDVIWQSFDHPTDTLLPMQNFTKGMRLISEHDSSNNLTYVLEIESHSGNVVLSTGLHSPQSYWSMQKDIRRIVNEKGDDVAFATLDRNSWKFYDNKRSLLWQFIIAADDDDSNATWIAVLGSDGIITFMNLQKKDSIASSRRIPQDSCSTPQPCDSYNICFGDRKCSCPSVLSVRPSCEPGFVSPCNSKNSIELMKGDDGLSCFALEFLQPSLKTDLIGCKNSCSENCSCLAMFFHESSVSRDRNTDINTDTTGASGDNNTQTIVVVIIVILTLFVISGMIYVGLKYMKKKENLSESPVENSDDDDGFLESLTSMPIRFSYNDLETATNNFAVKLGQGGFGSVYKGILQDGTQIAVKKLEGIGQGKKEFRVEVSIIGSIHHHHLVRLKGFCAEGSHKLLVYEYMENGSLDKWIFKKNKSEQSLDWNTRYNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDSNFEAKVSDFGLAKLMNREQSHVFTTMRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDANENSEKSHFPSFAYKMMEQGKVEDLVDPEVKMVENDVRVEIGLNVAFLCIQEDMSLRPSMNKVVQMLEGLCDVPKVAKGSPLGSKFYLNLLRPTSESGTSSEPLEGYSDAYLSAVRLSGPR* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0667 898 ProSitePatterns Protein kinases ATP-binding region signature. 580 603 IPR017441 GO:0005524
Psa6g0667 898 Gene3D - 142 254 IPR036426 -
Psa6g0667 898 Gene3D Transferase(Phosphotransferase) domain 1 649 852 - -
Psa6g0667 898 SUPERFAMILY Protein kinase-like (PK-like) 555 845 IPR011009 -
Psa6g0667 898 Pfam D-mannose binding lectin 183 267 IPR001480 -
Psa6g0667 898 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 124 898 - -
Psa6g0667 898 ProSiteProfiles Protein kinase domain profile. 574 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0667 898 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 124 898 - -
Psa6g0667 898 CDD STKc_IRAK 580 847 - -
Psa6g0667 898 ProSitePatterns Serine/Threonine protein kinases active-site signature. 695 707 IPR008271 GO:0004672|GO:0006468
Psa6g0667 898 Pfam Protein kinase domain 578 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0667 898 SMART serkin_6 574 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0667 898 Gene3D Phosphorylase Kinase; domain 1 542 648 - -
Psa6g0667 898 CDD B_lectin 144 256 IPR001480 -
Psa6g0667 898 SMART blect_4 142 256 IPR001480 -
Psa6g0667 898 ProSiteProfiles Bulb-type lectin domain profile. 136 253 IPR001480 -
Psa6g0667 898 SUPERFAMILY alpha-D-mannose-specific plant lectins 184 276 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0667 Psa-Chr6 22784678 22792322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0667 553 850 Receptor kinase-like Gene Family AT5G20050 47.284 6.33e-88 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Psa6g0667 Pkinase 3.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0667 - - gmx:100787500 1057.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0667 6 22784678 22792322 Psa6g0667 6 22784678 22792322 ECH
Psa5g0672 5 54367158 54370534 Psa6g0667 6 22784678 22792322 ECH
Psa6g0667 6 22784678 22792322 Psa5g0672 5 54367158 54370534 PCT