Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0666 ATGTCTAGAGAAGTCATGGCTACTTCATCTTCTGTTCCTTTTGATTATGAGATCTTGGATAAAGATCCTGACATACCTAGAACAGCTGTGGTCCAATCCAATCGGACGAACCCGTGGATTGAGCCCGAAACTTTGAAACTTCAGCACCGAATTGGTCGAGGACCCTTTGGCGATGTTTGGCTTGCAACTCTTCATCAGTCAACTGAGGATTATGATCAACACCATGAAGTTGCTGCTAAGATGTTGCATCCTGTCAGAGAGGATCATGTGAAGATTGTACTGGAGAAGTTTAATGATTTGTACTTTAAGTGCCTAGGAGTTTCTAGTGTTTCTTGGATACATGGAGTTTCAATGATCAATGGAAGGATCTGCATCATTATGAAATTGTATGAAGGTTCAATTGGTGACAAGATGGCTAGATTAAGAGAAGGATGGATTTCATTACATGATGTTTTGAGGTATGGGATTAATCTGGCTCAAGGTATTCTGGAGCTTCACTCTAAAGGGATCCTTGTTCTGAACCTTAAACCTTGCAATGTTCTTCTCAATGACAATGGTCAAGCGATTTTGGGAGATGTTGGTATTCCCAATCTTTTGCTTGGTTCCTCATTCGTTAGCTCAGATATTGCTCAGAGGCTTGGAACTCCTAATTACATGGCCCCGGAACAATGGAAACCAGAGGTTGGAGGTCCTATATCTATTGAAACCGATTCATGGGGATTTGGTTGCACCATTGTTGAAATGTTGACTGGTAATCAGCCTTGGTACGGATGCCCTGTTGGTGGAATTTATGGATCAGTTGTTGAAAAGCATGAAAAGCCGCTTTTCCCAAGTGGCCTTCCTTCTCCCATCGAGAATATCCTTAGTGGATGTTTTGAGTATGATTTAAGAAACCGCCCTTTGATGGTAGATATTCTGCGCGTCTTTAAAAGCTCGCTGAGTGAACTGGGCAATGATGGAGGATGGCGATATCAAGGAAATATGAAAGTAATTGCAAAATCAGGCAGCACTGACTACACCGAATGGTTCCTCTCAAAGGATCACCTGCAGGTGGGCGACATGGTCCGATCCAGAAAGTCTCCTAACTCATGCAAAGCTCAAAATATGGATGTCCCAGAAGGAACTGTTGTTGGTCTAGAACGCACTGCGGATCATGGATTCGTTCTTGTGAGGGTCCACGGTATTCACGACCCTATAAGAATTCATGTGTCAACTCTCGAACGGGTCACAGATGGCTTGGCAGCTGGTGATTGGGTACGTGTTAAAGATAAAAACCAGAAACACTCGCCAGTTGGCATTCTACATACCATCAATCGTGATGACGGTAGAGCTGCTGTTGGATTTATCGGGCTGCAAACTCTCTGGAACGGAAACCCTTCTGACCTTGAAATGTCAGAATCATTCTGTGTAGGACAGTTCGTTAGGCCAAAAGAGAATATCTTAAGCCCTCGATTTGAATGGCGTCGTAAACGGGGAGGGGCCTCAGCTACTGGTCGGATTTCGTGGATTCTACCAAATGGGTGTTTGGTAATCAAGTTCCCAGGGTTGCTGACTTTTGGGAATGAATCAAACACCTTTTTGGCTGATCCTTCTGAGGTTGAAGTGGTTGATTTCAAGGCTTGTCCTGGGATTATGGAAAAGTATGAACATATTGAGGATCATCACTGGGCAGTTAGACCTGTTCTAGTTGCACTCGGCATATTAACAGCTTTGAAACTAGGTATATTAGCTGGAAACAAAGTAAGGAGGTGCAAGAAGTTTAATGCAATAATAGAAAGCAAAAACCAATATCTGGAAGGTCAAAACACCAATAGTCCTACAAGGAATGTAATAAGTCATGGCAACACAGCCTGGGTTCCTTCAGTTGCTAATATCCTTTTCAAAGATGGTGCTTAA 1896 0.4314 MSREVMATSSSVPFDYEILDKDPDIPRTAVVQSNRTNPWIEPETLKLQHRIGRGPFGDVWLATLHQSTEDYDQHHEVAAKMLHPVREDHVKIVLEKFNDLYFKCLGVSSVSWIHGVSMINGRICIIMKLYEGSIGDKMARLREGWISLHDVLRYGINLAQGILELHSKGILVLNLKPCNVLLNDNGQAILGDVGIPNLLLGSSFVSSDIAQRLGTPNYMAPEQWKPEVGGPISIETDSWGFGCTIVEMLTGNQPWYGCPVGGIYGSVVEKHEKPLFPSGLPSPIENILSGCFEYDLRNRPLMVDILRVFKSSLSELGNDGGWRYQGNMKVIAKSGSTDYTEWFLSKDHLQVGDMVRSRKSPNSCKAQNMDVPEGTVVGLERTADHGFVLVRVHGIHDPIRIHVSTLERVTDGLAAGDWVRVKDKNQKHSPVGILHTINRDDGRAAVGFIGLQTLWNGNPSDLEMSESFCVGQFVRPKENILSPRFEWRRKRGGASATGRISWILPNGCLVIKFPGLLTFGNESNTFLADPSEVEVVDFKACPGIMEKYEHIEDHHWAVRPVLVALGILTALKLGILAGNKVRRCKKFNAIIESKNQYLEGQNTNSPTRNVISHGNTAWVPSVANILFKDGA* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0666 631 Pfam Protein tyrosine and serine/threonine kinase 45 307 IPR001245 GO:0004672|GO:0006468
Psa6g0666 631 SUPERFAMILY Protein kinase-like (PK-like) 44 308 IPR011009 -
Psa6g0666 631 ProSiteProfiles Protein kinase domain profile. 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0666 631 PANTHER OS06G0639500 PROTEIN 1 630 - -
Psa6g0666 631 CDD STKc_PknB_like 46 311 - -
Psa6g0666 631 Gene3D Transferase(Phosphotransferase) domain 1 131 341 - -
Psa6g0666 631 PANTHER OS06G0639500 PROTEIN 1 630 - -
Psa6g0666 631 Gene3D Phosphorylase Kinase; domain 1 24 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0666 Psa-Chr6 22760637 22764582 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0666 25 317 MAP Kinase Kinase Kinase AT2G17700 25.168 5.37e-20 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Psa6g0666 PK_Tyr_Ser-Thr 1.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0666 - - gsj:114393396 1009.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0666 6 22760637 22764582 Psa6g0666 6 22760637 22764582 ECH