Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0658 ATGCCTTCACACAAGACATTCATCATCAAGAAGAAGCTCGCCAAGAAGCAGAGGCAGAACAGACCCATCCCTTACTGGATCCGCATGAGAACCGACAACACCATCAGGTATAACGCTAAGCGTCGTCACTGGCGCCGTACCAAGCTTGGATTCTGA 156 0.5064 MPSHKTFIIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF* 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0658 51 Gene3D Ribosomal protein L39e 1 51 IPR023626 -
Psa6g0658 51 Pfam Ribosomal L39 protein 9 49 IPR000077 GO:0003735|GO:0005840|GO:0006412
Psa6g0658 51 Hamap 50S ribosomal protein L39e [rpl39e]. 1 51 IPR000077 GO:0003735|GO:0005840|GO:0006412
Psa6g0658 51 ProSitePatterns Ribosomal protein L39e signature. 30 46 IPR020083 GO:0003735|GO:0005840|GO:0006412
Psa6g0658 51 PANTHER 60S RIBOSOMAL PROTEIN L39-2 1 51 - -
Psa6g0658 51 SUPERFAMILY Ribosomal protein L39e 3 50 IPR023626 -
Psa6g0658 51 PANTHER RIBOSOMAL PROTEIN L39E 1 51 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0658 1 51 Cytoplasmic Ribosomal Protein Gene Family AT4G31985 88.235 2.05e-29 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0658 K02924 - sind:105177533 108.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0658 6 22351489 22353573 Psa6g0658 6 22351489 22353573 ECH