Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0611 ATGGCATTGTTTCGCAAGTTCTTTTATAAGAAACCCCCTGATGGCCTTCTTGAAATCACTGAAAGGGTTTATGTGTTTGATTACTGTTTTACGACGGATGTTATGGGCGAGAACGAATACAAAATTTATATAGGAGGAATAATTAGGCAAATTGGCGAGCATTTCCCCGACGCTTCGTTTATGGTGTTCAACATGAGGGAAGGAGAACACCAAAGTCATATATCGAACATTTTGTGCGACTATGATATGACTGTGATGGACTATCCTAGACAGTATGAAGGTTGTCCGTTGCTTACGATGGAAATGATTCATCATTTCTTGAGGTCGGGTGAAAATTGGCTTCAACTCGGGCAACAGAATATCGTCTTGATGCATTGCGAACGAGGTGGGTGGCCGGTTTTAGCATTTATGCTGGCTTCGCTCCTGATTTATAGAAAAATGTTTACGGGGGAACAGAAAACATTGGATATGATATATAAACAAGCGCCTCGGGAACTTTTGCAGTTGATGTCACCGTTGAATCCTTTACCTTCACAATTGAGGTATCTTCAATATATATCAAGAAGAAATGTTGGTTCCGAATGGCCTCCTCTGGATAGGGCGCTTACGTTGGATTGCGTAATTATAAGGCAAATTCCTAATATGGACGGAGAGGGTGGTTGCCGTCCTATTTTTAGGATATACGGACAGGATCCCTTTATTCCCGCGGATCGGACTCCCAAAGTTCTCTTCTCTACTCCAAAAAAGAGCAAACTTGTTCGGTACTTTAAGCAGGCTGATTGTGAACTTGTGAAGATTGATATCCATTGTCATGTTCAAGGTGATGTTGTACTTGAGTGTATTAGTTTGGAAAGTGATTTGGAACGTGAACAAATGGTGTTCCGAGTTATGTTTAATACAGCATTCATAAGATCAAATATTTTGATGCTCAACCGCGATGAAATCGACATGTTATGGAATGCTAAAGATCACTTTCCAAAAAATTTTAGAGTAGAGGTTCTTTTCTCAGATATGGATACTTCTTCGTCTTCTGTTATTTCAGTCGATCTTCCTCCTCGTACGGAGGAGAAAGAAGGTCTACCTGTTGAAGCATTTGATAAAGTTAAGGAAATTTTCAGCCATGTTGATTGGCTCGACCCGAAGACAGATGTAGCAAATATGCTCCAACAGATCACATCATCGAATATCCTTCTAGAAAGATTGGACAGCGGAGGAAGTTCTGGTTCACCCAACACCGTGCTAAACGAGTCATTATCCGGAAGATTAAAATTTGATTCGAAGACACAATACGAAACGAGCAGTCTGAAATCTCCCGATCACGAGGAAGTTTCAGTGTTTCCATTGCAGTCATCTGAAGATGCTACCGAGGAAAAAGTGCTGGAACCGAAATTGTCATCACAAGAGAAAATCAAGACTCCTGCGAGTATAGGTCAAGCGGTCAAGCCTGTTCCTTTGTTTGATCTGTCAAAAGATTCAGAGTCTACTAAAATTGAGACTGAATCATCAGAATCGAAACACTCATTGGGAACCGATATCAAACTTCCTACTAATAAGGCTCAGGCGGAGCAATCTATCCCCGTAATAGAACCATCGATAAATGCAAATTCAACGGGCAAAAAGAGTGGATCTTTGGAATCTGAGCAAAAGAATATTGTCTCACTAGCATCGAATGAGGCGGTATTGGAAAAGGACACTACGCTTCCTTCATCGGAATCTTCTACTGTTGCAACCGCTATGAAAAATATTAAACCGTCAGGATCAAAAGAAAAGAAGGTTGAATCATTAGACTCGGAGGCTCGGTTGAAAAATGATAGCCGACCTAAATTTGAACCAAAGACTCAGCTAGAAGTTTCAGTACCGTCGTTTGAATCATTTGGGGATGCTAACTTGGAAAAGAAGAAAGAACCATTAGATTTAGTTGATGAGGGGCAACAACATATTCCCTCAATTGGACTCGCAAAAGATTCAGATCTTACTGAAATGAAGATTGAATCATTAAAATCAAAGGCACCGGTGGAAAACGATACCAAGTTTCCTATGTCTACGGCTCAAGGGAAACAATCTATTCCGTTAGTTGTACCATCCGCGGAAGCGAGTTCATTGGAACAGACGATGGAGAAACTAAAGCCAAAGAAAAAGGATAGTGAATCATTAGAATCAAATGATACCAAGTTTCCTATGTCTACGGCTCAAGGTAAACAATCTACTCCCTTGATTGCACCATCCACGGAAGCAGATTCAACGGAACAGATGACGGAGAAGTTAAAGTCAAAGAAAAAGGATAATGAATCATTAGAATCAAAGTCATTATTGGAACACGATACCAAGTTTCCTATGTCTGTGGCTCAAGGGAAACAATCTATTCCCTCGATTGCACCATCCACGGAAGCAGATTCAACTGAACAGATGATAGAAAAGTTAAAGTCAAAGAAAAAGGATAATGAATCATTAGAATCAAAGTTGTTGTTGGAACATGATACCAAGTTTCCTATGTCTGTGGCTCTAGGGACACAATCTATTCCCTCGATTGAACCATCCGTGGAAGCAGATTCAACGAAACAGGCAGTGAAGTTAAAGTCAAAGAAAAAGGATACTGAATCATTAGAATCAAAGTCATTGTTGGAAAATGATACCAACCGGGAAAAATCAGTTCCTTTAATTCAAACGTCGATGGATTCAAGTTCAAAGAAAACAATGCTTGAAAAATCAGAATCCCCAGTGTTGTCGGAAAATGACATCAAGAGTCTTACATCCAAGGTTCATAAGAAACAAACCAGTCCCTTAGTTGAACCCTTCGTTGACGCAAAATCAATTAAAAAGAAGATTGATCCTCAAGAGTTGCAGGTTTCTCTTCAGCTACCTACGCAATCTAAAATAATTTCTCCAAGGATGCATCAAGCTATTCGACCGACTTCAGCTTCCGCTTCCTATTCTTCTTCCTCCTTGCCAGGTTCACCTGTAGCTGTCTCAAGGTATCACAGTGCACCGTCGGCTCTCGGAATAACAAGTGTGTTGCAAGATCATACACCGATGGATAGCAAAGAAGAACTTGCTCATGCAGTGTCGATATCTCCTCCTTCAGATTCAAAGGTGCCAAAGTCTGTAGAGCCTTGTTCTAAAAGTATTCCGAAAACATCATCATCCTCGGAATTGCTTCCATCTTTGCCGTTAAAGCCTTCAGCGGATCCTCCTGCTGCTGTCGAAAAGACGATTAAGCCACTTGTTCCCATCCTTCCTCCACCTCCGACTCCACCTCCTCCTCCTCCTCAACAAGAACCTACTTCAAATTTGATGCAATCTACTGTTACTGTTACACAATACAGTGAAAATTCAATGCACGATAAAAGCCAGATATCATCGGCTATTCCTCCTCCTCCCTCCCCTTCTTCGTCCCTTGCTAAAACATCTCTTTCCACCGTCAAAGATTCATCGAAAGGACCTCCTCCCCCACCTCCACCACCACTTCTATCTTCAACTACACAAACTTCATCATCGTCAATACCTCCTCCTCCAGTTCCTCCTCCACGAAGTACAAACAATTCCATTGCTATGCCTGGTCCTCCTCCTCCACCTCCACCTCCAAGACAATCTGGCACGACACCATTAGCGCCACCACCACCTCCTCCTCCTACTTCTGCATCCCAAAATTCTGTGTCTAAAACCGCTCCAAATGTTCCACCTCCACCTCCTTCTCCTTCTGCCGATGGATCATCAAAACCTCCACCTCCTCCTCACGCAGTTCCCAGACCACCCGGAAATGCACCTCCAGTTCCCGGAGCTCCCGGAAGCGTGCCTCCAATTCCCGGACCACCTTCTGGTGCATTTGGTGCAAAGGGACGTGGAATGTTGCGAGCTAATGCGAAAACTCAGACTAAAAGAAGCAACCTGAAACCGTACCATTGGTTAAAGTTAACAAGGGCCATGCATGGTAGCTTGTGGGCCGAGACTCAGAAACTCGATGAAGCTTGTAGGGCTCCAGAGTTCGACATGACAGAGCTTGAGAGTCTTTTTTCAGCAGCCACTCCGAATTCTAATAATGACAAAGGAAAATCAAATCGCCGTTCAGGGCAAAAACCCGACAAAGTTCAAATAATTGAACTCAGACGGGCGTATAACTGCGAGATTATGCTTACAAAAGTCAAAATTCCATTACCTGATTTAATGAGTAATGTTCTTGCATTGGACGATTCCGTGTTATATGTTGATCAGGTTGAGAACCTTATAAAGTTCTGTCCGACTAAAGAAGAGATGGACCAGCTCAGGGCCTACACTGGAAGTATGGAAAACTTGGGGAAGTGTGAACAGTTCTTTTTAGAATTAATGAAAGTTCCAAGAGTGGAAAGCAAGCTAAGAGTTTTCTGTTTTAAGATGCAATTCTGCACCCAGGTTTCAGACCTCAAAAGGGACTTGAATATTGTAAATTCTGCATCGGAACAGATAAGGGATTCGGTCAAATTGAAAAGAATCATGCAGACCATTCTTTCCCTTGGTAATGCTTTGAACCATGGAACCGCAAGAGGTGCTGCGGTTGGGTTTCGATTGGATAGTCTTCTTAAACTCACTGATACACGAGCCCGAAACAACAAAATGACCCTCATGCATTATCTTTGTAAGGTGCTTGCTGAAAAGCTTCCGGAACTTTTAGATTTCCCTAAAGACCTAGTCAGTTTGGAGGCTTCAACCAAGCTACAATTGAAATATCTGGCAGAAGAAATGCAAGCTATTAGTAAAGGACTGGAGAAAGTAATTCAAGAACTGTCTGCATCAGAAAACGACGGGCCCATATCAGAATACTTCTGCCAGATTCTGAAAGAATTTCTTAGTCACGCCGAAGCTGAAGTGAGGTCTTTGGCTCAGCTTTATGCCAATGTGGGTAGAAATGCAGATGCGTTGGCGCTATACTTCGGAGAAGACCCGGCACGTTGCCCATTCGAACAAGTTGTATCTACACTGCTCAACTTTGTGAGGATGTTCATCCGAGCACACGACGAAAATTGCAAGCAGGTTGAATATGAAAAGAAGAAAGCAGATAAGGAAGCTGCAGCAGAAAATGAGAAATTGAAGCTAGCTGCGAGAAACGAGTCTAAACCTATGATGAGGACCACCATCAAGAGCGGCGATGTTAAATAA 5130 0.424 MALFRKFFYKKPPDGLLEITERVYVFDYCFTTDVMGENEYKIYIGGIIRQIGEHFPDASFMVFNMREGEHQSHISNILCDYDMTVMDYPRQYEGCPLLTMEMIHHFLRSGENWLQLGQQNIVLMHCERGGWPVLAFMLASLLIYRKMFTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYISRRNVGSEWPPLDRALTLDCVIIRQIPNMDGEGGCRPIFRIYGQDPFIPADRTPKVLFSTPKKSKLVRYFKQADCELVKIDIHCHVQGDVVLECISLESDLEREQMVFRVMFNTAFIRSNILMLNRDEIDMLWNAKDHFPKNFRVEVLFSDMDTSSSSVISVDLPPRTEEKEGLPVEAFDKVKEIFSHVDWLDPKTDVANMLQQITSSNILLERLDSGGSSGSPNTVLNESLSGRLKFDSKTQYETSSLKSPDHEEVSVFPLQSSEDATEEKVLEPKLSSQEKIKTPASIGQAVKPVPLFDLSKDSESTKIETESSESKHSLGTDIKLPTNKAQAEQSIPVIEPSINANSTGKKSGSLESEQKNIVSLASNEAVLEKDTTLPSSESSTVATAMKNIKPSGSKEKKVESLDSEARLKNDSRPKFEPKTQLEVSVPSFESFGDANLEKKKEPLDLVDEGQQHIPSIGLAKDSDLTEMKIESLKSKAPVENDTKFPMSTAQGKQSIPLVVPSAEASSLEQTMEKLKPKKKDSESLESNDTKFPMSTAQGKQSTPLIAPSTEADSTEQMTEKLKSKKKDNESLESKSLLEHDTKFPMSVAQGKQSIPSIAPSTEADSTEQMIEKLKSKKKDNESLESKLLLEHDTKFPMSVALGTQSIPSIEPSVEADSTKQAVKLKSKKKDTESLESKSLLENDTNREKSVPLIQTSMDSSSKKTMLEKSESPVLSENDIKSLTSKVHKKQTSPLVEPFVDAKSIKKKIDPQELQVSLQLPTQSKIISPRMHQAIRPTSASASYSSSSLPGSPVAVSRYHSAPSALGITSVLQDHTPMDSKEELAHAVSISPPSDSKVPKSVEPCSKSIPKTSSSSELLPSLPLKPSADPPAAVEKTIKPLVPILPPPPTPPPPPPQQEPTSNLMQSTVTVTQYSENSMHDKSQISSAIPPPPSPSSSLAKTSLSTVKDSSKGPPPPPPPPLLSSTTQTSSSSIPPPPVPPPRSTNNSIAMPGPPPPPPPPRQSGTTPLAPPPPPPPTSASQNSVSKTAPNVPPPPPSPSADGSSKPPPPPHAVPRPPGNAPPVPGAPGSVPPIPGPPSGAFGAKGRGMLRANAKTQTKRSNLKPYHWLKLTRAMHGSLWAETQKLDEACRAPEFDMTELESLFSAATPNSNNDKGKSNRRSGQKPDKVQIIELRRAYNCEIMLTKVKIPLPDLMSNVLALDDSVLYVDQVENLIKFCPTKEEMDQLRAYTGSMENLGKCEQFFLELMKVPRVESKLRVFCFKMQFCTQVSDLKRDLNIVNSASEQIRDSVKLKRIMQTILSLGNALNHGTARGAAVGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFPKDLVSLEASTKLQLKYLAEEMQAISKGLEKVIQELSASENDGPISEYFCQILKEFLSHAEAEVRSLAQLYANVGRNADALALYFGEDPARCPFEQVVSTLLNFVRMFIRAHDENCKQVEYEKKKADKEAAAENEKLKLAARNESKPMMRTTIKSGDVK* 1710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0611 1709 MobiDBLite consensus disorder prediction 1222 1255 - -
Psa6g0611 1709 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Psa6g0611 1709 MobiDBLite consensus disorder prediction 801 815 - -
Psa6g0611 1709 Gene3D Protein tyrosine phosphatase superfamily 12 191 IPR029021 -
Psa6g0611 1709 MobiDBLite consensus disorder prediction 879 912 - -
Psa6g0611 1709 Coils Coil 797 820 - -
Psa6g0611 1709 Coils Coil 748 768 - -
Psa6g0611 1709 MobiDBLite consensus disorder prediction 704 720 - -
Psa6g0611 1709 MobiDBLite consensus disorder prediction 1007 1255 - -
Psa6g0611 1709 SMART it6_source 1073 1707 IPR015425 -
Psa6g0611 1709 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1359 1685 - -
Psa6g0611 1709 MobiDBLite consensus disorder prediction 837 912 - -
Psa6g0611 1709 MobiDBLite consensus disorder prediction 854 878 - -
Psa6g0611 1709 MobiDBLite consensus disorder prediction 666 815 - -
Psa6g0611 1709 Gene3D - 196 341 - -
Psa6g0611 1709 MobiDBLite consensus disorder prediction 1074 1093 - -
Psa6g0611 1709 MobiDBLite consensus disorder prediction 721 748 - -
Psa6g0611 1709 MobiDBLite consensus disorder prediction 749 773 - -
Psa6g0611 1709 MobiDBLite consensus disorder prediction 1039 1054 - -
Psa6g0611 1709 PANTHER FORMIN-J 1 788 - -
Psa6g0611 1709 PANTHER FORMIN-J 1200 1702 - -
Psa6g0611 1709 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Psa6g0611 1709 Gene3D Formin, FH2 domain 1305 1698 IPR042201 -
Psa6g0611 1709 MobiDBLite consensus disorder prediction 1094 1120 - -
Psa6g0611 1709 MobiDBLite consensus disorder prediction 675 702 - -
Psa6g0611 1709 MobiDBLite consensus disorder prediction 1166 1213 - -
Psa6g0611 1709 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1286 1684 IPR015425 -
Psa6g0611 1709 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Psa6g0611 1709 MobiDBLite consensus disorder prediction 1338 1359 - -
Psa6g0611 1709 MobiDBLite consensus disorder prediction 508 581 - -
Psa6g0611 1709 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Psa6g0611 1709 MobiDBLite consensus disorder prediction 491 615 - -
Psa6g0611 1709 Coils Coil 1659 1693 - -
Psa6g0611 1709 Pfam Formin Homology 2 Domain 1288 1658 IPR015425 -
Psa6g0611 1709 MobiDBLite consensus disorder prediction 780 800 - -
Psa6g0611 1709 MobiDBLite consensus disorder prediction 584 611 - -
Psa6g0611 1709 SMART PTEN_C2_2 197 337 IPR014020 -
Psa6g0611 1709 MobiDBLite consensus disorder prediction 491 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0611 Psa-Chr6 20501716 20509228 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0611 1 439 FH2 protein (formin) Gene Family AT2G25050 66.364 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0611 - - cam:101501499 1067.76