Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0608 ATGGAACCAACATGCATCGACACTTCACTCAATCTTAACAACATCAATCTCCCTTCAACATACAAGGACGAAGTTTTGGTTGAAGAGTTACATCGTCTAAGTTGCGAGAACAAGAGACTAAGTGAAACATTGACAAACATGTGTGAGAGTTACGAAGCTATGCAAAAGCAATTGAGTCAATTGATGATGAATCAGAATTTTGAAAACCAAACACAAGAATCAAGGAAGAGAAAATTCGAGAGTGAAAGTTGCATGAACATGTTTGGTGGTGTTAGAGAGTGCAGCAATGTTAGTGATGAAGAATCATTGATGAAAAGACCTTGTAGGGATATTTCATCACCTAAGGCTTATAAGGTTCTTGTGAAGACAGAAGCATCTAGTAATAGCTTGTATGTGATGGATGGATATCAATGGAGGAAATATGGTCAAAAGGTTACTAGAGATAATCCTTCTCCTAGAGCTTACTTTAGATGCTCCAAAGCTCCAAATTGCCCGGTTAAAAAGAAGGTGCAAAAAAGTTTAGAAGACCCTACTATACTAGTTGCAACATATGAAGGAGAGCACAATCATGGTCATGAAAAAGCTGAAATATCAATGATATCAAGCCAATGTGAAGAAGCGCGTTTAGGTTCAGTTCATGTTTCTTCACCTAAACAAATTATGGAAAGGACTTCTCCAAGCATGAACCTTAACTTGGTTGACAATGTTCAAAAATCATCTATCCAACAATTTTTGGTTCAACAAATGGCTACTTCTTTGACAAATGATCCCAATTTCACTACAGCACTTGCTAATGCTATTTCAGGAAGAATATTAGACAACGCTAATAAAGCTAGATTTTGA 843 0.3665 MEPTCIDTSLNLNNINLPSTYKDEVLVEELHRLSCENKRLSETLTNMCESYEAMQKQLSQLMMNQNFENQTQESRKRKFESESCMNMFGGVRECSNVSDEESLMKRPCRDISSPKAYKVLVKTEASSNSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSKAPNCPVKKKVQKSLEDPTILVATYEGEHNHGHEKAEISMISSQCEEARLGSVHVSSPKQIMERTSPSMNLNLVDNVQKSSIQQFLVQQMATSLTNDPNFTTALANAISGRILDNANKARF* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0608 280 SUPERFAMILY WRKY DNA-binding domain 129 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa6g0608 280 SMART WRKY_cls 132 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa6g0608 280 Gene3D WRKY domain 116 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa6g0608 280 Pfam WRKY DNA -binding domain 134 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa6g0608 280 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 274 IPR044810 GO:0003700
Psa6g0608 280 ProSiteProfiles WRKY domain profile. 127 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa6g0608 280 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0608 Psa-Chr6 20468195 20469602 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0608 4 271 WRKY Transcription Factor Family AT1G80840 41.438 2.67e-67 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa6g0608 WRKY 1.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0608 - - gmx:100810978 322.398