Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0598 ATGGGAACAAATCTCAGCATTCCCAGAACTGAAAAGTTCTCTGAAGATGGCGAAAATGAGAATCTTAGATATGGATTATCATCTATGCAAGGTTGGCGTGCAACAATGGAAGATGCACATGCGGCACATCTTGATGTGGATTCATCCACTTCATTTTTTGGAGTTTATGATGGTCATGGAGGTAAGGCAGTTGCAAAGTTTTGCGCCAAGCATCTTCACCAACAGGTACTCAAGAGTGAAGAATACATAGCTGGAGATGTTGGAACATCACTTCAGAAAGCATTTTTCAGAATGGACGAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTAGCGGTCTTGGGTGATAAGGTAAAAGGATTCAATGGAATGATTGAAGGATTGATTCGGTCTCCAAGAAGCAGTGATAATAATAATAATAAGGACCAAAGTGATGATTGGGGATTTGAGAAGGGACCTCATTCTGATTTTGATGGACCAACTTCAGGAAGTACTGCCTGTGTCGCAATCATTAGAAACAACCTAATTTTTGTCGCAAATGCCGGTGATTCTCGCTGCATAATATCTAGGAATGGTCAGGCTTACAATTTGTCTAGAGACCACAAACCGGAACTCGCGATTGAGAAGGAAAGAATCTATAAAGCTGGAGGTTTTATTCACGCTGGACGAGTTAATGGGAGTTTAAATCTAGCAAGAGCTATAGGTGATGTGGACTTTAAGAATAATAGATTTCTTTCGGCTGAAAAACAAGCTGTCACCGCTAATCCAGACATAAACATTGTTGACCTTCACGACGAAGATGAATTTATAGTGATAGCTTGTGATGGCATATGGGATTGCCTGTCAAGCCAGCAATTGGTAGATTTTGTACGTCAAGAACTTCTCTTGGATACCAAACTTTCTGAGGTTTGTGAAAGAGTCCTCGACCGGTGTTTGGCGCCGTCTTTGGCTATGGGTGACGGATGCGATAACATGACAATGATTTTGGTGCAGTTCAAAAAACCAGTGCAGACTAATGCACGAGCTGAAGAACAATCATCTTCAAATGAAGAAGGTGCATCTGAACCAAGATTGGAGAGCAGTTGA 1086 0.418 MGTNLSIPRTEKFSEDGENENLRYGLSSMQGWRATMEDAHAAHLDVDSSTSFFGVYDGHGGKAVAKFCAKHLHQQVLKSEEYIAGDVGTSLQKAFFRMDEMMRGQRGWRELAVLGDKVKGFNGMIEGLIRSPRSSDNNNNKDQSDDWGFEKGPHSDFDGPTSGSTACVAIIRNNLIFVANAGDSRCIISRNGQAYNLSRDHKPELAIEKERIYKAGGFIHAGRVNGSLNLARAIGDVDFKNNRFLSAEKQAVTANPDINIVDLHDEDEFIVIACDGIWDCLSSQQLVDFVRQELLLDTKLSEVCERVLDRCLAPSLAMGDGCDNMTMILVQFKKPVQTNARAEEQSSSNEEGASEPRLESS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0598 361 ProSiteProfiles PPM-type phosphatase domain profile. 23 332 IPR001932 -
Psa6g0598 361 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Psa6g0598 361 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 344 - -
Psa6g0598 361 Gene3D - 1 333 IPR036457 -
Psa6g0598 361 MobiDBLite consensus disorder prediction 338 361 - -
Psa6g0598 361 MobiDBLite consensus disorder prediction 338 355 - -
Psa6g0598 361 SUPERFAMILY PP2C-like 4 333 IPR036457 -
Psa6g0598 361 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Psa6g0598 361 Pfam Protein phosphatase 2C 158 314 IPR001932 -
Psa6g0598 361 SMART PP2C_4 13 330 IPR001932 -
Psa6g0598 361 CDD PP2Cc 23 332 IPR001932 -
Psa6g0598 361 PANTHER PROTEIN PHOSPHATASE 2C 1 344 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0598 Psa-Chr6 20286375 20289975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0598 1 344 PP2C-type Phosphatase Gene Family AT2G25070 71.512 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0598 K17499 - sind:105164872 568.155