Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0590 ATGGCATCAAACTATTTTTACAAGGATGTGCTTCCATTGACTGCAATGGTTGCAATGGAGTTCACAAACGTTGGTGTTAGTGTTCTATTCAAAGCAGCCACTCAAAAGGGATTGAGTTTCTATGTCTTCATTGCTTATTCATATGTTGTCTCCACTCTTGTTCTTCTTTTGCCTCTCCCCTTCTTCTTCAAACGGTCAAGAGGGCTTCCCCCTTTGAACGTCTCTCTAATCTTCAGAATCTTTCTCCTTGGAGTTTTGGGAGTTGTGGCTCAGCTATTTGGATATAAAGGACTTGAATACACAACACCTACTCTTGCTTCTGCTCTTGCCAACCTTATACCTGCTTTTACATTCATCCTAGCTATCTTTTTCAGGATGGAGAACATAATTATAAGACGCAAAAGCAGTCAAGCCAAAATATTAGGTTCTACGGTATCAATATTAGGTGCACTCGTAGTTGTACTTTATAAGGGTCCAATGATTATATCTTCACCAACAACAAAGCCACTACATACTATTGTTTCTCCAATAAATCTAACAACACAATCAAATTGGATTATCGGTGGATCTCTACTTGTTATTGAGTTTCTCATTATTCCAATCTGGTACATTGTTCAGACAAATGTCATCAAACAATATCCATCAGAGATTATTGTGGTCTTTTTGTATAACCTATGTGGAGCACTAGTGTCTGTTCCAGTATGCTTACTGCTAGAACCAAACTTGAGTGCATGGAAAATAAATCCCGATATCGAGTTGATCTCCGTTATATACTCGGGAATTTTCTGCACTGGACTAAGTAGTCTTGTTCACACTTGGGGACTCCATGTTAAAGGCCCTTTATATATATCAATGTTTAAGCCATTGTCAATAGCTATTGCTGCATGTATGAGTGCTATATTCCTTGGTGATGCACTCTATTTTGGAACTGTTGTTGGAGCAGTAGTAATATCGATTGGATTTTATGCTGTTTTATGGGGAAAATCCAAAGAAGAATTGAATGATGATTTTGACACAAAGAAAGTTCCAGATTCATACAATAGCAAAACTCCTTTGTTGAAAGACTAA 1068 0.3755 MASNYFYKDVLPLTAMVAMEFTNVGVSVLFKAATQKGLSFYVFIAYSYVVSTLVLLLPLPFFFKRSRGLPPLNVSLIFRIFLLGVLGVVAQLFGYKGLEYTTPTLASALANLIPAFTFILAIFFRMENIIIRRKSSQAKILGSTVSILGALVVVLYKGPMIISSPTTKPLHTIVSPINLTTQSNWIIGGSLLVIEFLIIPIWYIVQTNVIKQYPSEIIVVFLYNLCGALVSVPVCLLLEPNLSAWKINPDIELISVIYSGIFCTGLSSLVHTWGLHVKGPLYISMFKPLSIAIAACMSAIFLGDALYFGTVVGAVVISIGFYAVLWGKSKEELNDDFDTKKVPDSYNSKTPLLKD* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0590 355 PANTHER WAT1-RELATED PROTEIN 11 332 IPR030184 GO:0016021|GO:0022857
Psa6g0590 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 157 - -
Psa6g0590 355 Pfam EamA-like transporter family 25 154 IPR000620 GO:0016020|GO:0016021
Psa6g0590 355 Pfam EamA-like transporter family 191 325 IPR000620 GO:0016020|GO:0016021
Psa6g0590 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 223 330 - -
Psa6g0590 355 PANTHER WAT1-RELATED PROTEIN 11 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0590 Psa-Chr6 20183178 20184685 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0590 1 332 Nodulin-like Gene Family AT5G40240 56.287 1.76e-132 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0590 - - mtr:MTR_1g014510 548.51