Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0586 ATGGGGACTGAAATTGAGTTAAAAGATAGCTCTCCCATTCTCATCAAGCAAGGAGCTGAAGCTAGAGTCTTTGAGTCTTCTTTTGTGGGAAGAAGGTCTATTGTCAAGGAGCGATTCTTAAAGAAGTACATGCATCCAACTTTGGATTCTAAGCGCTTAAATGTGGAGGCAAGATCATGTGGTGTCAATGAAGAGCGGCTTGGCAGGATTGCATCCCAAATTGGTGATGTTATTGCAAAGTTACATGATGGTGGTCTTGTTCATGGGGACTTAACAACATCGAACATGTTACTAAGGAATGATATTGGTCAGTTGGTTCTTATTGACTTCGGTCTGAACTTCACTTCAACTTTACCCGAAGATAAAGCTGTTGATTTGTATGTCCTGGAAAGAGCCCTTGTTTCGATGCATTCTTCATGTGGCAACATTATTGATCGGATCCTTGCTGCTTACCGCAAGTCATAG 465 0.4172 MGTEIELKDSSPILIKQGAEARVFESSFVGRRSIVKERFLKKYMHPTLDSKRLNVEARSCGVNEERLGRIASQIGDVIAKLHDGGLVHGDLTTSNMLLRNDIGQLVLIDFGLNFTSTLPEDKAVDLYVLERALVSMHSSCGNIIDRILAAYRKS* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0586 154 Gene3D Transferase(Phosphotransferase) domain 1 56 154 - -
Psa6g0586 154 ProSitePatterns Tyrosine protein kinases specific active-site signature. 86 98 IPR008266 GO:0004672|GO:0006468
Psa6g0586 154 ProSiteProfiles Protein kinase domain profile. 1 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0586 154 TIGRFAM arch_bud32: Kae1-associated kinase Bud32 66 153 IPR022495 GO:0004674
Psa6g0586 154 Pfam Lipopolysaccharide kinase (Kdo/WaaP) family 62 134 - -
Psa6g0586 154 PANTHER EKC/KEOPS COMPLEX SUBUNIT BUD32-LIKE ISOFORM X1 61 154 - -
Psa6g0586 154 PANTHER EKC/KEOPS COMPLEX SUBUNIT BUD32-LIKE ISOFORM X1 2 59 - -
Psa6g0586 154 PANTHER O-SIALOGLYCOPROTEIN ENDOPEPTIDASE 2 59 IPR022495 GO:0004674
Psa6g0586 154 PANTHER O-SIALOGLYCOPROTEIN ENDOPEPTIDASE 61 154 IPR022495 GO:0004674
Psa6g0586 154 CDD PKc 55 112 - -
Psa6g0586 154 SUPERFAMILY Protein kinase-like (PK-like) 42 128 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0586 Psa-Chr6 20087661 20088254 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Cr-1 Psa6g0586 Kdo 1.1e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0586 K08851 - pop:7480688 218.009