Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0585 ATGATAATTTGGAACCTTTTTCACGCAAGAATAAGCTCTACGCACGCAATATCGCTATTGTTTCTTCTTCATATTTTCCTTTTTTTGGTTAAACAAGTTGTTTCTGGGAACCTTGAATATTCAACCTGTGATATGGGCTACCTCAATTCTGTTTTGTCTTCTTCAAGTCAGGTTCACGCTGCTGATGATTCACCTGTTAGTGGTGGAGGACTCAGTCAGAATGGAAAGTTCAGCTATGGATATGCTAGCTCCCCTGGCAAGAGATCTTCAATGGAAGATTTTTACGAGACAAGAATTGACGGCGTTGATGGCGAAGTTGTTGGTCTTTTTGGAGTTTTTGATGGTCACGGCGGCGCTCGTGCTGCAGAGTATGTCAAGCAAAACCTGTTCAGCAATTTGATCAGTCACCCAAAATTCATTTCTGACACCAAATCTGCAATAGCTGATGCATATACGCATACCGACTCTGAATTTCTGAAATCAGAAAATAACCAAAACAGGGATGCTGGATCTACTGCTTCTACTGCCATTCTTGTTGGTGATCGCTTGCTTGTTGCAAATGTCGGGGACTCTAGAGCTGTTATTTGCAGGGGTGGAAATGCCATTGCTGTGTCCCGAGATCACAAACCAGATCAAACCGATGAGAGGCAAAGGATAGAAGATGCAGGCGGTTTCGTTATGTGGGCTGGAACTTGGAGAGTTGGTGGTGTTCTTGCTGTTTCTCGCGCATTTGGTGATAGACTCCTTAAGCAATATGTTGTTGCTGATCCAGAAATTCAGGAAGAAAAAGTCGATAGCTCTCTCGAGTTTCTTATATTGGCTAGCGACGGGCTATGGGATGTTGTCTCTAACGAGGAAGCTGTTGCTATGATTAAACCGATCGAGGATGCAGAGGTGGCAGCAAAGAGGCTGATGAAAGAAGCGTATCAGAGAGGCAGTTCAGACAACATTACTTGTGTGGTTGTTCGTTTCCTGATGAACAACCAAGGTTCTTCGTCTCGTAATAGCTCTGGCTAA 1017 0.4385 MIIWNLFHARISSTHAISLLFLLHIFLFLVKQVVSGNLEYSTCDMGYLNSVLSSSSQVHAADDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEVVGLFGVFDGHGGARAAEYVKQNLFSNLISHPKFISDTKSAIADAYTHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKPIEDAEVAAKRLMKEAYQRGSSDNITCVVVRFLMNNQGSSSRNSSG* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0585 338 SMART PP2C_SIG_2 73 324 IPR001932 -
Psa6g0585 338 Pfam Protein phosphatase 2C 106 317 IPR001932 -
Psa6g0585 338 PANTHER ALPHABET, ISOFORM E-RELATED 47 332 - -
Psa6g0585 338 SMART PP2C_4 68 322 IPR001932 -
Psa6g0585 338 ProSitePatterns PPM-type phosphatase domain signature. 109 117 IPR000222 GO:0043169
Psa6g0585 338 SUPERFAMILY PP2C-like 72 324 IPR036457 -
Psa6g0585 338 CDD PP2Cc 77 324 IPR001932 -
Psa6g0585 338 ProSiteProfiles PPM-type phosphatase domain profile. 78 324 IPR001932 -
Psa6g0585 338 Gene3D - 70 329 IPR036457 -
Psa6g0585 338 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 47 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0585 Psa-Chr6 20067180 20071503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0585 45 335 PP2C-type Phosphatase Gene Family AT4G31750 90.476 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0585 K17506 - gmx:100795017 592.423