Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0507 ATGGCATTTCAATTTGGAGTACTCTTTCTTCTTGTTTTTTCCATTTGTTTCAATGTCAAATCAGTGGATTCAGATGATGGGTCAACATTGTTGGATATAAAGAAGTCATTCAGGGATGTGGATAATGTTCTATATGATTGGACTGACTCATCAACATCAGATTATTGTGCTTGGAGAGGAATTTCATGTGATAATGTCACCTTCAATGTTGTTGCACTCAATCTTTCTGGGCTGAATCTTGACGGTGAAATCTCGCCTTCTATAGGGAACCTTAAGAGCTTGGTCTCTATTGATTTAAAAGAAAACCGGTTATCAGGTCAGATACCAGATGAGATTGGTGACTGTTCTTTGTTGCAGGACTTGGATTTGTCATTTAATGAAATTCGGGGGGATATACCATATTCAATTTCTAAGCTGAAACAATTGGAGAATCTGATTTTGAAGAATAATCAATTGATTGGACCAATTCCTTCAACATTGTCTCAGATTCCTAATTTGAAGAACCTGGACCTGGCACAAAATAATCTTAGTGGTGAAATTCCAAGGCTTATATACTGGAATGAAGTTTTGCAATATCTTGGCTTGCGAGGGAACAACTTGGTCGGTTCATTATCTCCGGACATGTGCCAGTTGACTGCCTTGTGGTACTTTGATGTGAGAAACAATAGCCTAACAGGAAGTATTCCCGAAAACATAGGCAATTGTACTTCCTTCCAAGTCTTGGATTTATCTTACAACCAGTTGACCGGAGAAGTTCCATTCAATATCGGGTTTCTACAAATCGCAACCTTGTCATTGCAAGGGAATAAACTCTCCGGGCATATTCCATCGGTGCTTGGTCTCATGCAAGCACTTGCTGTGTTAGACTTGAGCTGTAACATGTTAACTGGATCAATTCCTCCTATTTTGGGTAATTTGACTTACACTGAAAAATTGTACTTGCATGGAAATAAGCTGACTGGTTTCATCCCTCCGGAGCTTGGAAATATGTCAAAGCTTCATTATTTGGAGTTGAATGATAATAATCTAAGTGGACATATCCCACCGGAGCTTGGAAAGCTTACAGATCTATTTGACTTAAATGTTGCTAACAACAACCTTGAGGGGCCAATTCCCGGTAACATTAGCTCGTGTAAAAACCTTAACAGCCTAAATGTGCATGGGAATAAGCTGAATGGAACAATACCCTCTACTTTCCAGAGCTTGGAGAGTATGACCTCTTTGAATCTTTCGTCAAACAACCTTCAAGGCTCCATTCCAATTGAACTGTCACGGATCGGGAATTTGGATACATTGGATATTTCAAACAATGAATTAATCGGACCAATTCCTCCTTCCCTTGGTGATTTGGAACATCTTCTGAAGCTGAATCTGAGCAGAAACGGTTTAACAGGACCTATTCCTGCAGAGTTTGGTAATCTCAAAAGTGTTATGGATATTGATCTTTCCCATAACCAGCTCTCCGATTTTATTCCTGTAGAACTTAGTCAGCTTCAGAACATAGGATCATTGAGGCTTGAATACAATGACTTAACGGGGGATGTGGCATCGCTTGTAAATTGTCTCAGTCTTTCTCTTCTTAATGTGTCCTATAACAACCTAGTTGGTCTTATTCCCACAAACAACAACTTTACCAGATTTTCACCGGATAGTTTCATTGGAAATTCCGGTCTATGTGGTAATTGGCTGAATTATCCATGTCAAGGTTCTCACCCTACGGACCGAGTTACGTTATCTAAGGCGGCTATTCTAGGAATTACACTCGGTGCCCTTGTCATTCTTCTGATGATACTTCTGGCTGCTTGCCGACCACACCATCCAGCTCCATATCCTGATGGATCACTCGAAAAACCAGTTACATTCTCACCTCCAAAACTAGTGATTCTTCATATGAACATGGCACTTCATGTCTATGATGATATCATGAGGATGACTGAAAACCTAAGTGAGAAGTATATTATTGGAAGCGGTGCATCGAGTACGGTTTATAAATGTGTTCTTAAAAATTGCAAGCCAGTTGCCATAAAGAGGCTCTATTCTCACTATCCACAATACTTGAAGGAATTTGAGACGGAACTTGGAACGGTCGGCAGCATTAAGCACCGGAATCTGGTTAGTCTCCAAGGCTACTCTTTGTCCCCTTATGGTCACCTTCTCTTCTATGACTACATGGAAAATGGCAGTTTATGGGATCTTCTTCATGGACAAAGTAAGAAGAAAAAACTTGACTGGAATCTGCGTCTAAAAATAGCGCTCGGAGCGGCACAAGGACTTGCATATTTACACCATGATTGCAGTCCTCGCATCATCCATAGAGACGTGAAATCGTCAAATATTTTACTAGATGCAGATTTTGAGCCTCATCTAACTGATTTTGGCATTGCCAAAAGTCTCTGCCCTACAAAGTCTCATACTTCTACTTACATAATGGGCACAATTGGCTACATAGACCCCGAATATGCCCGAACTTCCCGTCTCACTGAGAAATCCGATGTCTACAGCTATGGCATTGTTTTACTTGAACTGCTAACCGGGAGAAAAGCCGTTGACAATGAATCCAACCTCCATCATCTAATTTTGTCCAAGACAGCTAGCAATGCAGTAATGGAAACGGTTGATCCCGACATAACTGCCACATGCAAGGACCTAGGAGCAGTTAAGAAAGTTTTTCAGCTTGCTCTACTATGCTCAAAGAGACAGCCAGCCGACCGGCCAACAATGCACGAAGTATCACGTGTATTAGGAAGTCTCGTCCCTTCAGTCACACCACCGAAACAACTAAACCCTCCCCAAGTTGCATCTAACCCGTCCGCCAAAGTTCCGTGTTACATGGACGAGTATGCAAATCTCAAGACACCACACTTGGTGAACTGTCCTTCCATGAGCACCTCAGATGCTCAACTCTTCCTCAAGTTCGGCGAAGTAATCTCTCAGAACAGCGAGTGA 2946 0.4151 MAFQFGVLFLLVFSICFNVKSVDSDDGSTLLDIKKSFRDVDNVLYDWTDSSTSDYCAWRGISCDNVTFNVVALNLSGLNLDGEISPSIGNLKSLVSIDLKENRLSGQIPDEIGDCSLLQDLDLSFNEIRGDIPYSISKLKQLENLILKNNQLIGPIPSTLSQIPNLKNLDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLVGSLSPDMCQLTALWYFDVRNNSLTGSIPENIGNCTSFQVLDLSYNQLTGEVPFNIGFLQIATLSLQGNKLSGHIPSVLGLMQALAVLDLSCNMLTGSIPPILGNLTYTEKLYLHGNKLTGFIPPELGNMSKLHYLELNDNNLSGHIPPELGKLTDLFDLNVANNNLEGPIPGNISSCKNLNSLNVHGNKLNGTIPSTFQSLESMTSLNLSSNNLQGSIPIELSRIGNLDTLDISNNELIGPIPPSLGDLEHLLKLNLSRNGLTGPIPAEFGNLKSVMDIDLSHNQLSDFIPVELSQLQNIGSLRLEYNDLTGDVASLVNCLSLSLLNVSYNNLVGLIPTNNNFTRFSPDSFIGNSGLCGNWLNYPCQGSHPTDRVTLSKAAILGITLGALVILLMILLAACRPHHPAPYPDGSLEKPVTFSPPKLVILHMNMALHVYDDIMRMTENLSEKYIIGSGASSTVYKCVLKNCKPVAIKRLYSHYPQYLKEFETELGTVGSIKHRNLVSLQGYSLSPYGHLLFYDYMENGSLWDLLHGQSKKKKLDWNLRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDADFEPHLTDFGIAKSLCPTKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLILSKTASNAVMETVDPDITATCKDLGAVKKVFQLALLCSKRQPADRPTMHEVSRVLGSLVPSVTPPKQLNPPQVASNPSAKVPCYMDEYANLKTPHLVNCPSMSTSDAQLFLKFGEVISQNSE* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0507 981 ProSiteProfiles Leucine-rich repeat profile. 165 187 IPR001611 GO:0005515
Psa6g0507 981 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Psa6g0507 981 Gene3D Ribonuclease Inhibitor 186 260 IPR032675 -
Psa6g0507 981 Gene3D Ribonuclease Inhibitor 442 568 IPR032675 -
Psa6g0507 981 Gene3D Ribonuclease Inhibitor 23 185 IPR032675 -
Psa6g0507 981 Gene3D Ribonuclease Inhibitor 346 441 IPR032675 -
Psa6g0507 981 Gene3D Ribonuclease Inhibitor 261 345 IPR032675 -
Psa6g0507 981 SUPERFAMILY Protein kinase-like (PK-like) 626 913 IPR011009 -
Psa6g0507 981 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA 8 968 - -
Psa6g0507 981 ProSiteProfiles Protein kinase domain profile. 648 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0507 981 SUPERFAMILY RNI-like 204 538 - -
Psa6g0507 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 769 781 IPR008271 GO:0004672|GO:0006468
Psa6g0507 981 Pfam Leucine rich repeat 380 439 IPR001611 GO:0005515
Psa6g0507 981 Pfam Leucine rich repeat 452 511 IPR001611 GO:0005515
Psa6g0507 981 SMART LRR_typ_2 91 115 IPR003591 -
Psa6g0507 981 SMART LRR_typ_2 330 354 IPR003591 -
Psa6g0507 981 SMART LRR_typ_2 474 498 IPR003591 -
Psa6g0507 981 SMART LRR_typ_2 282 306 IPR003591 -
Psa6g0507 981 SMART LRR_typ_2 211 235 IPR003591 -
Psa6g0507 981 SMART LRR_typ_2 450 473 IPR003591 -
Psa6g0507 981 SMART LRR_typ_2 402 426 IPR003591 -
Psa6g0507 981 SMART LRR_typ_2 163 187 IPR003591 -
Psa6g0507 981 Gene3D Phosphorylase Kinase; domain 1 622 723 - -
Psa6g0507 981 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 968 - -
Psa6g0507 981 ProSitePatterns Protein kinases ATP-binding region signature. 654 676 IPR017441 GO:0005524
Psa6g0507 981 Pfam Protein kinase domain 651 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0507 981 SUPERFAMILY L domain-like 24 259 - -
Psa6g0507 981 SMART serkin_6 648 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0507 981 Gene3D Transferase(Phosphotransferase) domain 1 724 923 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0507 Psa-Chr6 16748958 16757977 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0507 93 980 Receptor kinase-like Gene Family AT5G07180 64.679 0.0 1117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Psa6g0507 Pkinase 2.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0507 K20718 - gmx:100782307 1729.15