Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0492 ATGATGTTTAGTACTATAATTTCAATTGTGTCTTTGGTTCTAGCTTTAATTGGAGGATACCTTTATGGGCCATTTTGGAGGTTAAGGAAAGTTCCAGGCCCACCATCTCTTCCACTTGTAGGACACCTTCCATTGTTAGCAAAGTATGGCCCTGATGTCTTCTCAATCCTTGCCAAGCAATATGGTCCAATTTACAGATTTCATATGGGAAGACAACCTCTTATAATCATAGCAGATCCAGAGCTTTGTAAAGAAGTTGGAATAAAAAAATTCAAAAACCTTTCAAATAGAAGCATTCCCTCTCCTATCTCTGCTTCTCCTCTTCACCAAAAAGGTTTATTCTTCACAAGAGACTCGCAGTGGACTTCGATGAGAAATACTATATTATCTGTATACCAACCATCACACTTAGCCAACTTAGTGCCAAAAATGCAATCAGTTATAGAATCTGCCACACAAAATCTTGACACACAAAAAGAAGACATAATCTTTTCAAATCTTTCCCTAAGACTAGCAACTGATATCATTGGAGATGCGGCATTCGGAGTCAACTTTGGTCTCTCTAAGCCTCAATCAATTTGTGAATCAATGAACAATCTTAACAATGTAAAACATTCAAGTGCTAGTAATGATGAAGTATCAAATTTCATCAATCAACATATTTACTCCACAACACAACTCAAGATGGATTTATCCGGTTCATTTTCGATTATAATTGGCCTAATTGCTCCTATTCTTCAAGAGCCATTTAGGCAGATTCTTAAGAGAATACCGGGCACTATGGATTGGAAAATGGAATGTACTAATAGAAATTTAACCGGTCGTCTTGACGAGATTGTTAAGAAGAGAATGGAAGATAAAAATCGAAGAACTTCGAAGAATTTCTTGTCGCTTATATTGAATGCAAGAGAATCAAAGAGTGTGTCGGAGAATGTGTTTCCGTTCGATTACATAAGCGCGGTCACTTACGAACATTTACTTGCTGGATCAGCCACAACATCTTTTACTTTGTCATCTATTGTTTATTTGGTTGCTGGTCACATAAATGTTGAGAGAAAATTGCTTCAAGAGATTGATGAGTTTGGAACACATGATAGGATACCTAATGCTAAAGACCTTAATGAAAGTTTTCCTTATCTTGATCAGGTGATTAAAGAGGCAATGAGGATTTACACTGTCTCTCCATTGGTTGCAAGAGAAACATCAAATGAAGTAGAGATTGGAGGTTACCTTCTTCCAAAGGGAACATGGGTATGGTTAGCACTTGGAGTTCTAGCAAAAGACTCAAGAAACTTTGCAGAGCCAGAGAAATTCAAACCAGAGAGGTTTGATCCAAAATGTGAAGAAATGAAAAGAAGGCATCCTTATGCATTCATACCATTTGGAATTGGTCCAAGAGCATGTATTGGCCAGAAATTTTCATTGCAAGAGATCAAGCTTACTTTGATTCATTTATATAGAAAATATGTATTTCGCCATTCACTTAGCATGGAAAAACCTATAGAACTTGAATATGGTTTAGTTCTTAATTTCAAGCATGGTGTCAAGCTTAGAGTAATAAAAAGAGCATAA 1572 0.3645 MMFSTIISIVSLVLALIGGYLYGPFWRLRKVPGPPSLPLVGHLPLLAKYGPDVFSILAKQYGPIYRFHMGRQPLIIIADPELCKEVGIKKFKNLSNRSIPSPISASPLHQKGLFFTRDSQWTSMRNTILSVYQPSHLANLVPKMQSVIESATQNLDTQKEDIIFSNLSLRLATDIIGDAAFGVNFGLSKPQSICESMNNLNNVKHSSASNDEVSNFINQHIYSTTQLKMDLSGSFSIIIGLIAPILQEPFRQILKRIPGTMDWKMECTNRNLTGRLDEIVKKRMEDKNRRTSKNFLSLILNARESKSVSENVFPFDYISAVTYEHLLAGSATTSFTLSSIVYLVAGHINVERKLLQEIDEFGTHDRIPNAKDLNESFPYLDQVIKEAMRIYTVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDSRNFAEPEKFKPERFDPKCEEMKRRHPYAFIPFGIGPRACIGQKFSLQEIKLTLIHLYRKYVFRHSLSMEKPIELEYGLVLNFKHGVKLRVIKRA* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0492 523 Pfam Cytochrome P450 32 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0492 523 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0492 523 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0492 523 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0492 523 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0492 523 PANTHER THROMBOXANE-A SYNTHASE 4 522 - -
Psa6g0492 523 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 522 - -
Psa6g0492 523 Gene3D Cytochrome P450 22 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0492 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Psa6g0492 523 SUPERFAMILY Cytochrome P450 25 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0492 523 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0492 523 PRINTS E-class P450 group I signature 171 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0492 523 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0492 523 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0492 523 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0492 523 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0492 523 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0492 523 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0492 Psa-Chr6 16377971 16381352 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0492 69 522 Cytochrome P450 AT2G26170 71.366 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0492 K20771 - gmx:100805689 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0492 6 16377971 16381352 Psa5g0846 5 66576923 66581862 PCT