Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0479 ATGATTCCAGTTTTTCTTCTCATTTTCCACTCTCTTCCTCATTCCTCTCTCGCCATCCGTCCTACTCTCTCCGATCGGTTAGATTTCGAACTCGCCAACTCCACGGACTCCAATGTCTCCCTCTCCACTCCTCGACAAGGCTCCTTCGCTGATATCATTGATCGAGCACTTCAGCACGAATTCACCGACAACGATGATCAAAACGAAGTGCCTGATTCCGGAGGTTTCAATAACAGTGTAGCAGAACAACAGGCTGTTCTGGAGACTGTGGCCAGAGTCACGCCGAACAAGAATGACACTAAAGATGAAAAGTCATTTCAACTCCATCATGTATTCGATAGAGGCGAGGACACCCCAATATTAATAGATCGAAAGGACAATGTATTTATCATTTCTAACTTTAAATCCAAGTATCCGGTGCTACAACTAGATTTACGATTGATTTCAGACTTGGTAGTGGCTATTGTTTCGGCAACTTGTGGCGGTGTTGCATTTGCTTTTGCTGGACAACCGGTCATTACTGGATATCTTTTAGCTGGCTCCATTGTTGGACCTGGAGGCTTTAACTTCATCAATGAAATGGTGCAGGTGGAAACAGTGGCTCAATTTGGCGTAATATTTATTCTCTTTGCAATGGGCCTGGAGTTTTCCATGACAAAGCTTCGTGTTGTCCGGTCTGTTGCAGTTCTTGGAGGCTTACTTCAGATTTTTCTATTTATGTGCATGTGTGGTTTTACTGTATCGTTATGTGGTGGTAAAGCTTCAGAAGGGATTTTTGTTGGTGCTTTCCTTTCCATGTCTTCAACAGCAGTGGTTTTGAAGTTTTTGATGGAAAAGAACACTACTAATGCCCTTCATGGACAAGTCACAATTGGGACCCTTATTTTACAGGATTGCACTGTTGGATTGCTCTTTGCATTGCTTCCAGTTTTGGGTGGAACCTCAGGTGTTTTTCAAGGAGTTATATCAATGACAAAGCTGTTGGTGACATTGATTGCATTTCTCTCTATTCTTTCAATATTGTCTCGCACTTGCCTTCCGTGGTTTCTTAAACTGATGATAAGCCTATCATCACAGACAAATGAACTCTATCAGCTGGCGGCTGTTGCATTCTGCTTGCTTGTAGCCTGGTGTAGCGATAAGCTGGGATTAAGTCTAGAGCTAGGTTCCTTTGCTGCTGGAGTGATGATTGCAACCACTGATCTGTCTCAACATACACTAGAACAAATTGAACCTATTTGCAATCTTTTTGCTGCTCTTTTCCTTGCCAGCATTGGAATGCTGATTCATGTACATTTTCTCTGGAACCATGTTGATATTTTGGTAGCATCGGTAATTTTGGTGATTGTAATTAAAACAATCATAATTGCTTCAGTTGTAAAAGGATTTGGTTACAATAACAAGACTTCAGTACTTGTGGGGATGTCCATGGCACAGATAGGAGAATTTGCTTTTGTTCTTCTCAGTCGTGCTTCAAATCTTCATCTAGTTGAGGGTAAACTATATCTGCTGCTTCTGGGGACCACAGCTCTTAGTCTGGTCACGACCCCTTTACTTTTCAAGCTGATTCCTGGTGTAGTGCATCTTGGTGTGCTATTGAGGTGGTTTTCTCCCGACAGTACAGCAGAGATTGGATATAAGGTAGATATCCTCGTCCGCTCAGATAGTGGGTTATGGATGCAAGTCCATCGTCCCAACATGTTCCATGATGGATATTTGCATACCAAACTGACACAAATACTAACCAAGGCATCTTTCCCGAAAACCCCGATGAAGTAA 1779 0.425 MIPVFLLIFHSLPHSSLAIRPTLSDRLDFELANSTDSNVSLSTPRQGSFADIIDRALQHEFTDNDDQNEVPDSGGFNNSVAEQQAVLETVARVTPNKNDTKDEKSFQLHHVFDRGEDTPILIDRKDNVFIISNFKSKYPVLQLDLRLISDLVVAIVSATCGGVAFAFAGQPVITGYLLAGSIVGPGGFNFINEMVQVETVAQFGVIFILFAMGLEFSMTKLRVVRSVAVLGGLLQIFLFMCMCGFTVSLCGGKASEGIFVGAFLSMSSTAVVLKFLMEKNTTNALHGQVTIGTLILQDCTVGLLFALLPVLGGTSGVFQGVISMTKLLVTLIAFLSILSILSRTCLPWFLKLMISLSSQTNELYQLAAVAFCLLVAWCSDKLGLSLELGSFAAGVMIATTDLSQHTLEQIEPICNLFAALFLASIGMLIHVHFLWNHVDILVASVILVIVIKTIIIASVVKGFGYNNKTSVLVGMSMAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPGVVHLGVLLRWFSPDSTAEIGYKVDILVRSDSGLWMQVHRPNMFHDGYLHTKLTQILTKASFPKTPMK* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0479 592 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 6 557 IPR045158 GO:0015386|GO:0071805|GO:1902600
Psa6g0479 592 Gene3D - 145 527 IPR038770 -
Psa6g0479 592 PANTHER K(+) EFFLUX ANTIPORTER 6 6 557 - -
Psa6g0479 592 Pfam Sodium/hydrogen exchanger family 152 521 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0479 Psa-Chr6 15769874 15779992 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0479 44 557 Antiporters AT5G11800 80.385 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0479 - - gmx:100811030 918.687