Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0462 ATGGAGCAGGGAGATATACCCGAGGATGCTAACGAGCATTGCCCAGGTCCTCAGTCTGATTCTGCTGGAAAATCTGATGCATGTGAAGGATGCCCAAATCAGGAAATTTGTGCCACTGCCCCCAAAGGACCTGACCCTGATATGGTTGCTATTGCCGAAAGAATGGCCACTGTGAAACATAAGATATTGGTCTTATCAGGAAAGGGAGGTGTTGGCAAGAGCACATTTTCTGCACAGCTAGCATTTGCTTTAGCTGCAAGGGATTTTCAAGTTGGTCTTCTTGATATTGACATTTGTGGTCCAAGCATCCCAAAGATGCTTGGCCTAGAAGGTCAAGAGATACACCAGAGCAACCTTGGGTGGTCTCCTGTCTATGTGGAGTCTAATCTTGGGGTCATGTCGATTGGGTTCATGCTTCCTCATCCAGATGAAGCTGTTATATGGAGAGGTCCTCGCAAAAACGGGCTTATCAAGCAGTTTTTGAAAGACGTTTACTGGGGTGAACTTGATTTTCTAATTGTTGATGCCCCACCCGGAACATCTGATGAACACATTTCAATTGTTCAATGCCTGGATCCCAATAATGTAGATGGTGCAATCATTGTTACCACTCCTCAACAAGTCTCTCTCATTGATGTGAAAAAAGAAGTGAATTTTTGTAAGAAAGTTGGAGTGAAAGTTCTTGGGGTGGTAGAGAATATGAGTGGCCTCTCCCAGCCCATCACAAATCTCAAGTTTATGAAGATTACAGATAATGGTGAAATGAAAGATGTAACAGAATGGATATCCGAATACATGAGAGAAAAAGCCCCTGAAATGCTGAATCTAATCGCGTGCAGTGAAGTATTTGATAGCAGTGGCGGTGGAGCATCAAAGATGTGCACGGAGATGGAGGTACCCTTTCTTGGTAAGGTTCCTTTAGACCCGCAGCTTTGCAAGGCAGCTGAAGAAGGTAGATCGTGTTTTGCAGATAAAAATTGTGTTGTGAGTGCTCCAGCGTTACAAAAGATAATAGATAAGTTGATGGAAACTAGTGGGTTGTCAATGACGGTTTTCACTACCAACTCGAGCTGCAAAATCAGTGAGTCAGAGCTATGTCGCGACGAGTCAACAGCGTTAATTCTAAAATTCGTGGCGATGGCGTCAATTCTAGTAGCGGGATTTTCCGGAATCGCGATACCGCTACTAGGAAAGCGGCGTGGAGTATTACGAGGCGACGGAGAGGTTTTACCGGCGGCGAAGGCTTTTGCGGCGGGAGTGATATTAGCGACGGGGTTTGTTCACATGCTTAAGGACGCGTGGGAAGCACTGAACCATAGTTGTTTGATGGAGAGGAAACAACGTGGCGGTGTGGCCGTGGAACACGGAGAGGTTGTCGGTGTCGTTGATGAGTTGGAGGAGGAATTGTTGGGAGAGGGGATTGTGGAAATTAAGGAAGAGAGTAGTAGTGGCAGTGGCGGTGGTGGGATGCATATTGTGGGGATGCATGCACATGCGTCGCACCATAGACATTCTCATCAGAACCATCATGATGATGATGAAGTACAACATGGACATGGACATGGTCATTCCCGTTCTTTCGGAGAGAACGATGACGTGGAAGGTAGTATCCGCCATGTGGTTGTTTCGCAGGTATTGGAACTTGGAATAGTTTCACATTCCATGATAATTGGGCTATCACTAGGAGTTTCACAAAGTCCATGCACAATGAGACCCTTAATTGCAGCACTATCCTTTCATCAATTCTTTGAAGGATTTGCACTTGGTGGTTGCATATCAGAAGCCAAATTTAAGACATCATCAGCAACAATAATGGCATGTTTTTTTGCACTAACAACACCACTTGGTGTTGCAATTGGGACATTAATTGCCTCGAATTTTAATCCTTATAGTCCTGGTGCTCTTATAACGGAAGGTATATTGGATTCTTTTTCAGCTGGAATTTTAGTGTATATGGCTTTGGTGGATTTAATAGCTGCTGATTTTCTTAGTAAGAGAATGCGATGTAGTTTTAGGCTTCAGATTTTGTGTTTTTGTTTGCTTTTTCTTGGGGCTGGATTTATGTCCTCACTTGCACTTTGGGCATGA 2088 0.444 MEQGDIPEDANEHCPGPQSDSAGKSDACEGCPNQEICATAPKGPDPDMVAIAERMATVKHKILVLSGKGGVGKSTFSAQLAFALAARDFQVGLLDIDICGPSIPKMLGLEGQEIHQSNLGWSPVYVESNLGVMSIGFMLPHPDEAVIWRGPRKNGLIKQFLKDVYWGELDFLIVDAPPGTSDEHISIVQCLDPNNVDGAIIVTTPQQVSLIDVKKEVNFCKKVGVKVLGVVENMSGLSQPITNLKFMKITDNGEMKDVTEWISEYMREKAPEMLNLIACSEVFDSSGGGASKMCTEMEVPFLGKVPLDPQLCKAAEEGRSCFADKNCVVSAPALQKIIDKLMETSGLSMTVFTTNSSCKISESELCRDESTALILKFVAMASILVAGFSGIAIPLLGKRRGVLRGDGEVLPAAKAFAAGVILATGFVHMLKDAWEALNHSCLMERKQRGGVAVEHGEVVGVVDELEEELLGEGIVEIKEESSSGSGGGGMHIVGMHAHASHHRHSHQNHHDDDEVQHGHGHGHSRSFGENDDVEGSIRHVVVSQVLELGIVSHSMIIGLSLGVSQSPCTMRPLIAALSFHQFFEGFALGGCISEAKFKTSSATIMACFFALTTPLGVAIGTLIASNFNPYSPGALITEGILDSFSAGILVYMALVDLIAADFLSKRMRCSFRLQILCFCLLFLGAGFMSSLALWA* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0462 695 Gene3D - 54 351 IPR027417 -
Psa6g0462 695 Pfam NUBPL iron-transfer P-loop NTPase 279 341 IPR033756 -
Psa6g0462 695 Pfam NUBPL iron-transfer P-loop NTPase 58 257 IPR033756 -
Psa6g0462 695 ProSitePatterns Mrp family signature. 166 182 IPR000808 GO:0005524
Psa6g0462 695 MobiDBLite consensus disorder prediction 506 530 - -
Psa6g0462 695 PANTHER NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED 1 343 IPR019591 GO:0005524|GO:0016226|GO:0051536|GO:0140663
Psa6g0462 695 CDD Mrp_NBP35 60 313 - -
Psa6g0462 695 Pfam ZIP Zinc transporter 374 692 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Psa6g0462 695 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 321 IPR027417 -
Psa6g0462 695 TIGRFAM zip: ZIP zinc/iron transport family 358 695 IPR004698 GO:0005385|GO:0016021|GO:0071577
Psa6g0462 695 MobiDBLite consensus disorder prediction 498 530 - -
Psa6g0462 695 MobiDBLite consensus disorder prediction 1 26 - -
Psa6g0462 695 Hamap Iron-sulfur cluster carrier protein. 53 342 IPR019591 GO:0005524|GO:0016226|GO:0051536|GO:0140663
Psa6g0462 695 Hamap Cytosolic Fe-S cluster assembly factor NUBP1 [NUBP1]. 7 346 IPR028601 GO:0016226|GO:0051536|GO:0051539
Psa6g0462 695 PANTHER CYTOSOLIC FE-S CLUSTER ASSEMBLY FACTOR NBP35 1 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0462 Psa-Chr6 15348914 15355110 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0462 353 695 Inorganic Solute Cotransporters AT1G10970 57.527 7.41e-122 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0462 - - gmx:100820246 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0462 6 15348914 15355110 Psa6g0462 6 15348914 15355110 ECH