Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0458 ATGCCGGATGTTCATATCCTTGTTAATGATTTTGTGAATCAGCTTAAAAAACGTAAAATTGAAGGTTCTCAGGCCTCGGCAAAGCAGACAGCAGAGTTGCTTCGGTCTGTGATTTCACAACAGAGCCTTTGCACAACAAACATTCCTTCCTTGCAACTTGGAGGCCGCGAGTTCAAATCTTGGACACATCCTCTCTGTTTGCGGGGGAAATATTACATACATCTACACTCCCCAAACTTCACTTGGTGGGAGCATCGTACACTGGGCTGCCCTTTATTTATTTTTTTCCTTCTAGTGGCATTTGCTATTGATAAGAGTTCAAGAGGTCGGAAGTTGAAGCACGATGTCATTGAAGCAGTTAATGAACTTATTCAAGACATATCTACTTGCTATGAACAAATAGCTGAACAAGCAGTAGAACACATTCATCAAAATGAGGTAATATTAACGCTAGGAAGTTCAAAGACAGTGTTGGAATTTCTTTGTGCTGCAAAGGAGAAAAAGAGATCATTTAAGGTCTTTGTTGCCGAAGGTGCCCCAAGATATCAGGGACATCTCCTTGCAAAAGAGTTGGCTGCTAGAGGCTTACAGACCACAGTGATTACTGATTCTGCAGTTTTTGCCATGATTTCCCGAGTGAACATGGTTATAGTTGGAGCTCATGCTGTCATGGCTAATGGTGGAGTCATTGCCCCAGTTGGATTAAATATGGTTGCACTTGCAGCTCAAAGGCATGCTGTTCCTTTTGTTGTACTTGCTGGAAGTCACAAGGATTTGAAGAATGGAAAATTGGAATTGAACAGTATTTGCATTTTATATGACGATAATGAAATAGCCACTTCTTAG 846 0.4113 MPDVHILVNDFVNQLKKRKIEGSQASAKQTAELLRSVISQQSLCTTNIPSLQLGGREFKSWTHPLCLRGKYYIHLHSPNFTWWEHRTLGCPLFIFFLLVAFAIDKSSRGRKLKHDVIEAVNELIQDISTCYEQIAEQAVEHIHQNEVILTLGSSKTVLEFLCAAKEKKRSFKVFVAEGAPRYQGHLLAKELAARGLQTTVITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLAGSHKDLKNGKLELNSICILYDDNEIATS* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0458 281 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA-LIKE 1 48 - -
Psa6g0458 281 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA-LIKE 103 257 - -
Psa6g0458 281 SUPERFAMILY NagB/RpiA/CoA transferase-like 8 261 IPR037171 -
Psa6g0458 281 Pfam Initiation factor 2 subunit family 102 269 IPR000649 GO:0044237
Psa6g0458 281 Gene3D - 130 279 IPR042529 -
Psa6g0458 281 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 1 48 - -
Psa6g0458 281 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 103 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0458 Psa-Chr6 15181204 15186701 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0458 1 47 Eukaryotic Initiation Factors Gene Family AT3G07300 65.957 1.28e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0458 K03754 - gmx:100778545 288.885