Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0456 ATGCATGCGTTTGCAGAGCTTGCTGTGGGAAATATTGCGAGGCGAGTTTTGCACATTATAAGGGAGGAGGATCTTTCCCTTGCCACAGCTGCTATAGCTGGTTTGGAGCTATCAGCTGTAAGCGACGATGAAGATGATGTGGATCGAGATGATTATCCTGTTTTATCTGCTGCTGCTGTTGCAGCTGCTGCAAGAAGCACCTTGCGTCCACCATCATTGCAAACTCTTCTAGAGGATACACCTATTACAGCTGCCATTCCACACACATCTTCTTCAGGGGGTGATTCTGAAGGGAAAAGTAGATCTATTGATAAGAGTTCAAGAGGTCGGAAGTTGAAGCACGATGTCATTGAAGCAGTTAATGAACTTATTCAAGACATATCTACTTGCTATGAACAAATAGCTGAACAAGCAGTAGAACACATTCATCAAAATGAGGTAATATTAACGCTAGGAAGTTCAAAGACAGTGTTGGAATTTCTTTGTGCTGCAAAGGAGAAAAAGAGATCATTTAAGGTCTTTGTTGCCGAAGGTGCCCCAAGATATCAGGGACATCTCCTTGCAAAAGAGTTGGCTGCTAGAGGCTTACAGACCACAGTGATTACTGATTCTGCAGTTTTTGCCATGATTTCCCGAGTGAACATGGTTATAGTTGGAGCTCATGCTGTCATGGCTAATGGTGGAGTCATTGCCCCAGTTGGATTAAATATGGTTGCACTTGCAGCTCAAAGGCATGCTGTTCCTTTTGTTGTACTTGCTGGAAGTCACAAGTTGTGCCCTTTGTATCCACACAATCCTGAAGTCCTATTAAACGAGCTGAGATCCCCGTCTGAGCTACTTGACTTTGGGGAGTTCTCGATTGCATGGATTCTGCAAGTGGTGAGGTTCTCTCCATGTCGTAAACCCTACGTTCGATTATGTGCCACCAAAATTGTTAGTCTCTTTATTACTGACACTGGAGGGCATAACCCATCATACATGTACCGGCTCATTGCTGAATATTCGGCTGATGATTTGGTGTTGAAACGAAGACCTGCTACTGCAGTTTGA 1050 0.44 MHAFAELAVGNIARRVLHIIREEDLSLATAAIAGLELSAVSDDEDDVDRDDYPVLSAAAVAAAARSTLRPPSLQTLLEDTPITAAIPHTSSSGGDSEGKSRSIDKSSRGRKLKHDVIEAVNELIQDISTCYEQIAEQAVEHIHQNEVILTLGSSKTVLEFLCAAKEKKRSFKVFVAEGAPRYQGHLLAKELAARGLQTTVITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSIAWILQVVRFSPCRKPYVRLCATKIVSLFITDTGGHNPSYMYRLIAEYSADDLVLKRRPATAV* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0456 349 PANTHER BNAA01G32370D PROTEIN 5 341 - -
Psa6g0456 349 MobiDBLite consensus disorder prediction 84 107 - -
Psa6g0456 349 Gene3D - 130 334 IPR042529 -
Psa6g0456 349 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 5 341 - -
Psa6g0456 349 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 334 IPR037171 -
Psa6g0456 349 Pfam Initiation factor 2 subunit family 101 324 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0456 Psa-Chr6 15152248 15160874 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0456 6 341 Eukaryotic Initiation Factors Gene Family AT3G07300 77.168 2.48e-169 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0456 K03754 - tcc:18587323 531.561