Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0452 ATGGGTATCTGCATATCCGTTGCATCTTCAGAGATCCATGGAATCCCTCAAGTTCATGATGAGAATGTCATGATATTTGAGGCAAATAAGGTTCAATATGAGACTAAGAGACTTTGTTCTGTTTACTCTAAACAAGGTACTAAAGGTCTCAATCAAGATGCTGCATCTCTCTACCAGGATTATGGGATAGAAGATGGAGCATTTTGTGGTGTTTATGATGGACATGGAAGGAATGGACATATAGTGAGCAAAATAGTAAACAATGGTTTACCATCTCTCATATTGAGCCAAAAGAATGCTATTGAGGAGAATGATACAACAAAAAATGGTGTTAACAATAAACAAAACAAATTTTCAAATAACTTTATAATATGGAAAGAAGCTATTCTTGGTGCTTTCAATGTGATGGATGATGAGGTGAAACAACAAGAGAATCTAGATTGTTCTTGTAGTGGAACCACTGCTGTAGTTGTCATAAGACAGGGTAATGGTCTTGTCATAGCTAATTTGGGTGACTCAAGAGCAATCTTAGGGACAATTCATGATGACAAACTCAAAGCTATTCAATTAACTACAGATTTGAAACCTGGATTGCCTTGCGAAGCAAAGAGAATAAGAAGTTGCAACGGTTGTGTTTATGCGTTAAAGGAAGAACCACATGTCCAACGAGTCTGGTTGCCGAACGAGAATTACCCTGGCCTAGCCATGTCTAGAGCTTTTGGAGATTTCATACTCAAAGATCATGGTGTTATTGCCATTCCAGATATTTGGTATCACCCTTTAACATCAAATGACCAGTTTATTGTTCTTGCAAGTGATGGGGTGTGGGATGTACTAAGTAATGAAGAGGTTGCATCAATTGTGTGGATGGTGGAAAGTGAAGAGGAAGCTGCAAGGGCAGTGGTGGAAGCAGCCACAGCTGCATGGGCTAAGAAGTATCCTTCTTCTAGGGTAGATGATTGCACTGTGGTTTGCCTTTTCCTACAGAAGAAACCACAAAACTTGGGGTATATGAAAAGTGGAAAATTAGGTTAA 1035 0.3903 MGICISVASSEIHGIPQVHDENVMIFEANKVQYETKRLCSVYSKQGTKGLNQDAASLYQDYGIEDGAFCGVYDGHGRNGHIVSKIVNNGLPSLILSQKNAIEENDTTKNGVNNKQNKFSNNFIIWKEAILGAFNVMDDEVKQQENLDCSCSGTTAVVVIRQGNGLVIANLGDSRAILGTIHDDKLKAIQLTTDLKPGLPCEAKRIRSCNGCVYALKEEPHVQRVWLPNENYPGLAMSRAFGDFILKDHGVIAIPDIWYHPLTSNDQFIVLASDGVWDVLSNEEVASIVWMVESEEEAARAVVEAATAAWAKKYPSSRVDDCTVVCLFLQKKPQNLGYMKSGKLG* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0452 344 CDD PP2Cc 37 328 IPR001932 -
Psa6g0452 344 ProSiteProfiles PPM-type phosphatase domain profile. 38 328 IPR001932 -
Psa6g0452 344 PANTHER ALPHABET, ISOFORM E-RELATED 1 333 - -
Psa6g0452 344 Pfam Protein phosphatase 2C 64 307 IPR001932 -
Psa6g0452 344 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 1 333 - -
Psa6g0452 344 Gene3D - 20 331 IPR036457 -
Psa6g0452 344 SUPERFAMILY PP2C-like 28 329 IPR036457 -
Psa6g0452 344 SMART PP2C_4 28 326 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0452 Psa-Chr6 14992914 14994307 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0452 1 333 PP2C-type Phosphatase Gene Family AT5G26010 53.529 1.32e-106 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0452 - - aip:107605550 464.922