Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0403 ATGTCATTCCAAGAAGAGAAATTTCCGGTCCGTTTCACATGTCATCCGGTTCACGAAACCATGTTCACACAAGGCGAAATAGAGGAGTTGTTTTCCCTAATTAACCAACCGGTTGACCCATCCAGTCCAGGTTCCGGTTCACAGGGATCAAACCGGGCGGTTTACTCAACACGCGAGAGAAAAATAAGGAGAATGCAATCGAACCGGGAGTCAGCTAGGCGGTCTCGTTGGAGAAAGAAGCGGCACGTAGAGAATCTCAATAATGACGTGAACCGGTTGAAAATCGAAAACCGGGAACTAAAAAACCGGCTCGGTTTAACCATGCAATACAATCTCATTTTATCCGCGGAGAATGAACGGCTAAGATCAGAAAAATTGTCACTCTTAGCAACACTTTTGGATCTATATCGAACTTTAGAGACAATAATTTCACAATAG 438 0.4406 MSFQEEKFPVRFTCHPVHETMFTQGEIEELFSLINQPVDPSSPGSGSQGSNRAVYSTRERKIRRMQSNRESARRSRWRKKRHVENLNNDVNRLKIENRELKNRLGLTMQYNLILSAENERLRSEKLSLLATLLDLYRTLETIISQ* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0403 145 MobiDBLite consensus disorder prediction 38 80 - -
Psa6g0403 145 MobiDBLite consensus disorder prediction 56 72 - -
Psa6g0403 145 SUPERFAMILY Leucine zipper domain 60 114 IPR046347 GO:0003700|GO:0006355
Psa6g0403 145 MobiDBLite consensus disorder prediction 38 55 - -
Psa6g0403 145 CDD bZIP_plant_GBF1 61 109 IPR045314 GO:0003700|GO:0006355
Psa6g0403 145 PANTHER BZIP TRANSCRIPTION FACTOR 44 22 144 - -
Psa6g0403 145 Coils Coil 83 103 - -
Psa6g0403 145 Gene3D - 58 112 - -
Psa6g0403 145 SMART brlzneu 56 120 IPR004827 GO:0003700|GO:0006355
Psa6g0403 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 58 104 IPR004827 GO:0003700|GO:0006355
Psa6g0403 145 Pfam bZIP transcription factor 60 105 IPR004827 GO:0003700|GO:0006355
Psa6g0403 145 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 63 78 IPR004827 GO:0003700|GO:0006355
Psa6g0403 145 PANTHER BZIP TRANSCRIPTION FACTOR 22 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0403 Psa-Chr6 13023376 13025151 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0403 16 139 bZIP Transcription Factor Family AT3G49760 38.168 8.88e-20 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa6g0403 bZIP_1 2.8e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0403 - - gmx:102668006 166.007