Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0395 ATGGATCTTGGTGTAATGAGTTTAGATGGTTTAGTTAGTTCAGATCCTGAACAAAAATCCAAATGGTTCAATGGATCTGGTTTACTCAAACAAGAGAGATCTGGAACAAGTACTGAAGATGAGTTATTAAGAACTTTCAAGCTTGCAAAAACTGATCAACAACAAAGAAACTCTTCTACCTCTTCCCTTTTGAGATCTAATGTTACCACTCTTTTCTCTGATGCTCAACACCAACAACAAATGCTTAGTTTCTCAACTCCTAATCCTAAATCAGAATCTTTTTTACTTGACAAAAATGCCCCTACATTGTCTTATGCTTATCATCATCCTAATCATAATCATCATCCTAATCCAATGTCTACTTACAACAGAAACACAGGCTATGGTTCTGGAAGCATGCATGGAGGGTTTAATGGTGTTAGAGGGCCATTCACACCTTCTCAATGGATGGAACTTGAACATCAAGCTTTGATCTATAAGTATATTACTGCAAATGTTGCTGTGCCTCATCATTTGCTTATTCCTATCAGAAAAGCTCTTGATTCTGCTGGCTTAAGTACCTTCTCATCTGCACTCCTCAGACCTAATGCATATGCAGTTGGGTGGGGAGGATTCCATCTGGGATACTCGAACAACACCGATCCGGAACCAGGAAGGTGTAGACGAACAGATGGAAAGAAATGGCGATGCTCAAGAGATGCCGTTGTCGATCAAAAGTATTGTGAAAGGCATATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCGGGCCAGGCTCTCACCACTGGTGGAACCACAAATACAGCTACTACTAATGTTTCTTCTACCATTACTACTCCAAGTGGTTCGTCGAAGCAAATCAATGTCGCTGCTTCTCCTTCTTCGTCTATTGTTGTTCCCGGTGGCAACAACGCTACCAACACTCTTTCCTTTGCACATCAGGAACATTCTAAGAATATGAACAGCCTTATTGGACAAGATAATGCTTCTTCTGCTGCCAACACCATCAACAGGATGTTCATGAATAGCAAAGAGAATAACAACAATAGTGAGAGGATGCAGGACGGTTCGGCACTACCGATGCTGCCACCAACCCTTGAGTTGAAACCGAAGGACAATAATTCCTTCATGATTCAAAAACAGCACATTCCTTATGATGAATCTTCAAGGAACAATGAATTCGGGTTTGTCACTTCCGATTCCCTGCTTAACCCTTCACAGAAAACCACTACCTTGCTTGGAACCAGAAACTTTGGTTCAGCTTCACAGAACCCTACAGACCGTGACACAGGCTCTCAACATTCACTCAGGCATTTCATCGACGACTTTCCCAAAACTCACTCTGATCATCACAATCATCATAACCGCTCGGGTGGTTTTTCTTGGCCGGAACTTGACATGCAGTCGGATAGGACACAGCTTTCAATCTCAACACCAATGACTGCCTCGGATTTCATGTCGTTCCCTTCCTCGGCCACCAATGAAAAACTCACACTTTCGCCTCTTAGGCTCTCAAGGGAAATCGACCCTATTCAAATGGGGTTAGGCGTCGGAAATAGTACTCCCAATAACAACGAATCATCAAACCCTAGTACTAATAATCCTGCCACAAGGCAAGCTAATTGGATTCCAATAACTTGGGAGAGCTCAATGGGTGGTCCACTCGGCGAAGTACTTCATCTTAGCACCATTGCTTGCAATGCAAGCGATGATCATTACGGGAGTAACAACATCAACAACAACAATTCCTCGGCTCTAAATCTCATGACTGATGGTTGGGACAATCACAATAGTCCACCGATGGGATCATCACCAACCGGCGTCCTTCAAAAAACAGCATTCGGATCACTTTCCAATAGTAGTGCCGGAAGTTCTCCAAGGGCCGAAAACAACAAAACAACTCAAGAAGGAGCTAGTTTGTGCAATGATCATCTAGGATCAACTCTTGGTAATAATAACACTTCCTTTACTCCTTAG 1989 0.4299 MDLGVMSLDGLVSSDPEQKSKWFNGSGLLKQERSGTSTEDELLRTFKLAKTDQQQRNSSTSSLLRSNVTTLFSDAQHQQQMLSFSTPNPKSESFLLDKNAPTLSYAYHHPNHNHHPNPMSTYNRNTGYGSGSMHGGFNGVRGPFTPSQWMELEHQALIYKYITANVAVPHHLLIPIRKALDSAGLSTFSSALLRPNAYAVGWGGFHLGYSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGQALTTGGTTNTATTNVSSTITTPSGSSKQINVAASPSSSIVVPGGNNATNTLSFAHQEHSKNMNSLIGQDNASSAANTINRMFMNSKENNNNSERMQDGSALPMLPPTLELKPKDNNSFMIQKQHIPYDESSRNNEFGFVTSDSLLNPSQKTTTLLGTRNFGSASQNPTDRDTGSQHSLRHFIDDFPKTHSDHHNHHNRSGGFSWPELDMQSDRTQLSISTPMTASDFMSFPSSATNEKLTLSPLRLSREIDPIQMGLGVGNSTPNNNESSNPSTNNPATRQANWIPITWESSMGGPLGEVLHLSTIACNASDDHYGSNNINNNNSSALNLMTDGWDNHNSPPMGSSPTGVLQKTAFGSLSNSSAGSSPRAENNKTTQEGASLCNDHLGSTLGNNNTSFTP* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0395 662 SMART QLQ_2 142 178 IPR014978 GO:0005524|GO:0005634|GO:0006355
Psa6g0395 662 MobiDBLite consensus disorder prediction 258 292 - -
Psa6g0395 662 PANTHER GROWTH-REGULATING FACTOR 9 17 639 - -
Psa6g0395 662 ProSiteProfiles QLQ domain profile. 143 178 IPR014978 GO:0005524|GO:0005634|GO:0006355
Psa6g0395 662 MobiDBLite consensus disorder prediction 246 292 - -
Psa6g0395 662 Pfam WRC 215 257 IPR014977 -
Psa6g0395 662 PANTHER - 17 639 IPR031137 GO:0005634|GO:0006351|GO:0032502
Psa6g0395 662 MobiDBLite consensus disorder prediction 620 662 - -
Psa6g0395 662 ProSiteProfiles WRC domain profile. 214 258 IPR014977 -
Psa6g0395 662 Pfam QLQ 143 177 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0395 Psa-Chr6 12808370 12812246 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0395 1 619 GRF Transcription Factor Family AT2G22840 38.605 2.64e-94 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Psa6g0395 WRC 6.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0395 - - cam:101496763 981.859