Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0373 ATGGGAACGGAGAGTTATACCTACATGGGACGGAGTTTCAACGAATTCACCATTAACGACGATTCTACTTCCTCCGCTTTCAGCGACTGTAACAGTGATAGATCCGGCGAATTCGCCACCACTTCTTCTCAATCCCGACGACTCATTATCGCCTGTGCTTCTGAAGATTCCGATGATCTCATCCGTCAACTCGTCTCCGATCTTCACTCCTCTTCAATCGAAGAACAGAAACAAGCCGCCATGGAAATCCGGTTAATCGCTAAAAATAAACCAGAAAATCGAATCAAAATCGCCAAAGCTGGCGCGATTAAGCCTTTAATTTCACTCGTATCTTCACAAGATCTTCAGCTTCAAGAATACGGCGTCACTGCAATTTTGAATCTCTCTTTATGCGACGAGAATAAAGAGTTAATAGCTTCAGCCGGAGCGATTAAGCCGTTAGTTAGAGCTTTAAACTCAGGTACTTCAACGGCGAAGGAGAACTCAGCCTGCGCGCTACTTCGTCTCGCACAAGTGGAAGGGAACAAGGCGGCGATTGGAAGATCCGGTGCTATTCCGTTACTAGTGAACCTTCTAGGAAGCGGCGGAATCCGCGGGAAGAAAGACGCGTCAACAGCGTTATACACGCTTTGCACGGTGAAGGAGAACAAGATGAGAGCGGTGAAAGCGGGGATTATGAAGGTTTTGGTTGAGTTAATGGCGGATTTTGAATCGAATATGGTGGATAAATCAGCGTATGTTGTGAGTGTTTTGGTGTCGGTGCCGGAGGCAAAGACGGCGCTGGTGGAGGAAGGTGGCGTTCCGGTGTTGGTGGAGATCGTGGAAGTTGGATCTCAGAGACAGAAAGAAATCGCAGCGGTTATTCTGTTACAGATTTGTGACGACAGCGTGACGTATCGAACCATGGTGGCTCGCGAAGGTGCCATTCCTCCTTTGGTTGCATTGACGCAATCCGGCACTAATCGCGCAAAACAAAAGGCTGAGAAACTAATTGAGCTTCTGAGGCAACCAAGATCTACACGTACTACTACATCAGAAATAGTACTAGCATAG 1053 0.4748 MGTESYTYMGRSFNEFTINDDSTSSAFSDCNSDRSGEFATTSSQSRRLIIACASEDSDDLIRQLVSDLHSSSIEEQKQAAMEIRLIAKNKPENRIKIAKAGAIKPLISLVSSQDLQLQEYGVTAILNLSLCDENKELIASAGAIKPLVRALNSGTSTAKENSACALLRLAQVEGNKAAIGRSGAIPLLVNLLGSGGIRGKKDASTALYTLCTVKENKMRAVKAGIMKVLVELMADFESNMVDKSAYVVSVLVSVPEAKTALVEEGGVPVLVEIVEVGSQRQKEIAAVILLQICDDSVTYRTMVAREGAIPPLVALTQSGTNRAKQKAEKLIELLRQPRSTRTTTSEIVLA* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0373 350 Pfam Armadillo/beta-catenin-like repeat 174 211 IPR000225 GO:0005515
Psa6g0373 350 Pfam Armadillo/beta-catenin-like repeat 91 129 IPR000225 GO:0005515
Psa6g0373 350 Pfam Armadillo/beta-catenin-like repeat 132 170 IPR000225 GO:0005515
Psa6g0373 350 Gene3D - 34 196 IPR011989 -
Psa6g0373 350 SMART arm_5 90 130 IPR000225 GO:0005515
Psa6g0373 350 SMART arm_5 296 336 IPR000225 GO:0005515
Psa6g0373 350 SMART arm_5 254 294 IPR000225 GO:0005515
Psa6g0373 350 SMART arm_5 213 253 IPR000225 GO:0005515
Psa6g0373 350 SMART arm_5 131 171 IPR000225 GO:0005515
Psa6g0373 350 SMART arm_5 172 212 IPR000225 GO:0005515
Psa6g0373 350 Gene3D - 200 346 IPR011989 -
Psa6g0373 350 PANTHER U BOX DOMAIN-CONTAINING 5 343 - -
Psa6g0373 350 SUPERFAMILY ARM repeat 56 332 IPR016024 -
Psa6g0373 350 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE ISOFORM X1 5 343 - -
Psa6g0373 350 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 101 143 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0373 25 338 U-box Gene Family AT2G23140 47.531 1.01e-86 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0373 - - gmx:100797550 568.926