Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0371 ATGACAGACGAAGAATCTTCAAGCGTGGCGATGAAATACACGAAACTAGATAGAGCCTGGCATGAACCTAACAAGAAACCTCTCACTCTTTGGCTCAATGGAGGTCCGGGATGTTCTTCAATTGGAGGAGGTGCTTTTACTGAATTGGGTCCGTTTTATCCTACCGGCGATGGACGAGGTTTGCGAAAGAATTCAATGTCTTGGAATAGAGCTTCGAATCTTCTCTTTTTGGAGTCTCCTGCTGGAGTTGGTTGGTCATACTCAAACACAACTTCCGATTATAACATCGGTGACGTCTCCACAGCCAATGATTCGCTTTTGTTCTTGCTCAAATGGTACGAGAAGTTTCCTACCTACAAATCGCGAGAGTTGTATCTGACCGGAGAAAGCTATGCAGGACATTACATACCTCAGTTAGCGAACGCTATTCTCGATTATAATGCTCGTTCAACCGGATACAAATTCAAATTGAAAGGAGTTGCTATTGGAAATCCATTATTGAATCTGGATCGTGATATGCAAGCAACATACGATTACTTCTGGTCACACGGAATGATTTCCGATGAAGTTGGTCTTGCCATTACAAATGATTGTGATTTTGATGATTATACATTTGCATCTCCTCATAATGTATCTGAATCATGCAACAATGCCTTAAATGATGCTAATAAAATCGTCGGCGATTATATAAACAGCTATGATGTGCTTCTCGATGTTTGTTATCCGGCCATAGTTGAACAAGAACTGAGATTGAAAAAGATGGCTACTAAAATTAGTTTAGGTGTAGATGTCTGCATGAGTTACGAACGGCGTTTCTACTTCAACCTCCCCGAGGTTCAAAAGGCTCTCCATGCTAACCGAACCAATCTTCCGTATCCATGGTCCATGTGCAGTCGCGTTTTAAATTACAGCGATACAGATCCTAACACAGATATGCTTCCAACTCTCAAACGGATTGTTCAAAACCACATTCCTGTATGGGTTTTTAGCGGAGACCAAGATTCTGTCGTGCCATTACTAGGTTCTCGAACACTGATTCGCGAACTAGCTCATGACCTGAAATTCAAGATTACAGTCCCATATGGAGCTTGGTTCCACAAAGGGCAGGTTGGAGGTTGGGCAACCGAATATGGAAATTTGCTGACTTTCGCTACGGTAAGAGGAGCAGCACACATGGTACCATATGCGCAACCTTCTAGAGCACTGCATCTATTCAGTTCCTTTGTGAATGGTAGGAGATTGCCAAACACAACTCGACCTTCAATCGATTAA 1272 0.4253 MTDEESSSVAMKYTKLDRAWHEPNKKPLTLWLNGGPGCSSIGGGAFTELGPFYPTGDGRGLRKNSMSWNRASNLLFLESPAGVGWSYSNTTSDYNIGDVSTANDSLLFLLKWYEKFPTYKSRELYLTGESYAGHYIPQLANAILDYNARSTGYKFKLKGVAIGNPLLNLDRDMQATYDYFWSHGMISDEVGLAITNDCDFDDYTFASPHNVSESCNNALNDANKIVGDYINSYDVLLDVCYPAIVEQELRLKKMATKISLGVDVCMSYERRFYFNLPEVQKALHANRTNLPYPWSMCSRVLNYSDTDPNTDMLPTLKRIVQNHIPVWVFSGDQDSVVPLLGSRTLIRELAHDLKFKITVPYGAWFHKGQVGGWATEYGNLLTFATVRGAAHMVPYAQPSRALHLFSSFVNGRRLPNTTRPSID* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0371 423 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 19 418 IPR001563 GO:0004185|GO:0006508
Psa6g0371 423 SUPERFAMILY alpha/beta-Hydrolases 5 414 IPR029058 -
Psa6g0371 423 PANTHER CARBOXYPEPTIDASE 19 418 - -
Psa6g0371 423 Gene3D - 312 411 - -
Psa6g0371 423 Pfam Serine carboxypeptidase 20 411 IPR001563 GO:0004185|GO:0006508
Psa6g0371 423 Gene3D alpha/beta hydrolase 2 249 IPR029058 -
Psa6g0371 423 PRINTS Carboxypeptidase C serine protease (S10) family signature 64 76 IPR001563 GO:0004185|GO:0006508
Psa6g0371 423 PRINTS Carboxypeptidase C serine protease (S10) family signature 77 87 IPR001563 GO:0004185|GO:0006508
Psa6g0371 423 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 137 IPR001563 GO:0004185|GO:0006508
Psa6g0371 423 PRINTS Carboxypeptidase C serine protease (S10) family signature 381 394 IPR001563 GO:0004185|GO:0006508
Psa6g0371 423 ProSitePatterns Serine carboxypeptidases, serine active site. 126 133 IPR018202 GO:0004185
Psa6g0371 423 Gene3D - 265 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0371 Psa-Chr6 11614786 11617867 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0371 271 414 Calmodulin-binding Proteins AT2G22960 25.170 2.74e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0371 K16297 - gmx:100815723 749.199