Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0368 ATGGCCCAACCCAACCCAGGAATAACCGAAAGAAAAAATGTAAATGGGCGGACCCAAACGGTCCAACGGGCCCAACGGGCGAAAATTGCGGATTCAATTGGTTTTAAATGGGCGGTCCGGGTAGAAATGACTGGACCGCGGGTGGAACATGTACGATCTGAGAGGAACTTGCTGGCAGAGGTTGATAGCCGATGCATAGTAAAACTCCATTATTCATTCCAAGATTCAGATTTCCTATATCTCATCATAGAATATTTGCCTGGCGGCGACATTATGACACTGTTGATGAGAGAAGATATTCTTTCTGAAAATGTTGCTCGCTTCTACATTGCTGAAAGTATTCTTGCTATCCACTCAATACATCAACACAACTACGTACATAGGGATATAAAACCAGATAACCTTATACTGGATAAAAATGGTCATTTGAAGCTTTCAGACTTCGGCTTACGTAAGACTCTTGATGACAATCTGTTAACTTTATCAACTTTTGCATTTCATCAGGCATATTCAACTGTTGGAACTCTTGACTACATGGCTCCAGAAGTTTTGCTCAAGAAGGGGTATGGAATAGAGTGTGATTGGTGGTCTCTTGGGGCAATCATGTATGAGATGCTTGTTGGATATACTCCATTTTGTTCTGATGATCCAAGAATGACCTGCCGGAAGATTGTGAATTGGAGAGCATGCCTGAAATTCCCCGAAGAACCTAAGATATCAGCTGAAGCTAAGGATCTCATCTGTAGCTTGCTATGTGATGTTGACACGAGACTAGGAACGAGGGGAGTAGACGAAATAAAGGGCTCATGA 810 0.4259 MAQPNPGITERKNVNGRTQTVQRAQRAKIADSIGFKWAVRVEMTGPRVEHVRSERNLLAEVDSRCIVKLHYSFQDSDFLYLIIEYLPGGDIMTLLMREDILSENVARFYIAESILAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLRKTLDDNLLTLSTFAFHQAYSTVGTLDYMAPEVLLKKGYGIECDWWSLGAIMYEMLVGYTPFCSDDPRMTCRKIVNWRACLKFPEEPKISAEAKDLICSLLCDVDTRLGTRGVDEIKGS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0368 269 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 46 159 - -
Psa6g0368 269 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 169 268 - -
Psa6g0368 269 PANTHER SERINE/THREONINE-PROTEIN KINASE 46 159 - -
Psa6g0368 269 PANTHER SERINE/THREONINE-PROTEIN KINASE 169 268 - -
Psa6g0368 269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Psa6g0368 269 Pfam Protein kinase domain 16 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0368 269 Gene3D Transferase(Phosphotransferase) domain 1 90 267 - -
Psa6g0368 269 SMART serkin_6 20 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0368 269 ProSiteProfiles Protein kinase domain profile. 7 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0368 269 Gene3D Phosphorylase Kinase; domain 1 47 89 - -
Psa6g0368 269 SUPERFAMILY Protein kinase-like (PK-like) 34 262 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0368 Psa-Chr6 11602989 11606389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0368 47 267 AGC Kinase Gene Family AT5G09890 74.319 3.43e-131 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Psa6g0368 Pkinase 4.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0368 K08790 - egt:105959210 368.622