Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0364 ATGAAGGTTCATCACTTCACACGTGGATTCTGGGAACATGAACCTTCCCTCTCTCTTGGTTGCAAACGTTTACGTCCTCTTGCACCAAAGATTTCCGATAACACACCTTCTCTTTCTTTTGATCTCAAGACTTTCATTAGACCAGAAACCGACGACAAGAAAGATCCACCTTCACCACAAAGCCAGGTTGTTGAAACGCATGTTCCAGGAGGGACGAGGTGGAATCCGACGCAAGAACAAATAGGAATATTGGAGATGTTATACAGAGGTGGAATGAGAACACCAAATGCACAACAAATAGAACAGATAACTGTTCAACTTAGCAAGTACGGTAAAATTGAAGGCAAAAATGTGTTTTATTGGTTCCAAAACCACAAAGCACGCGAGAGACAAAAGCAAAAACGTAACAGTCTTGGTCTTCCTCACAGTCCTCGTACTCCCACAACCACACTAGTGTCTCCTACCTTTAGTACTATTACAACTTTGGACACGCCTAAAAGGGGGGAAGGAATGAAAAGAAATCAAGAAGATAGTCCATTGAAGAAGAGTAGGAGTTGGCCATTTGAGTACTTAGAAGAGCAAAATTGGTCATCAATATGCAAACAAGAGGAACATAAAACTCTAGAGCTTTTCCCACTACACCCTGAAGGGAGATGA 657 0.4201 MKVHHFTRGFWEHEPSLSLGCKRLRPLAPKISDNTPSLSFDLKTFIRPETDDKKDPPSPQSQVVETHVPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPTTTLVSPTFSTITTLDTPKRGEGMKRNQEDSPLKKSRSWPFEYLEEQNWSSICKQEEHKTLELFPLHPEGR* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0364 218 MobiDBLite consensus disorder prediction 130 184 - -
Psa6g0364 218 CDD homeodomain 72 133 IPR001356 GO:0003677
Psa6g0364 218 SMART HOX_1 69 136 IPR001356 GO:0003677
Psa6g0364 218 ProSiteProfiles 'Homeobox' domain profile. 77 132 IPR001356 GO:0003677
Psa6g0364 218 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 218 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Psa6g0364 218 MobiDBLite consensus disorder prediction 48 71 - -
Psa6g0364 218 MobiDBLite consensus disorder prediction 137 164 - -
Psa6g0364 218 Gene3D - 71 138 - -
Psa6g0364 218 Pfam Homeodomain 72 131 IPR001356 GO:0003677
Psa6g0364 218 MobiDBLite consensus disorder prediction 166 184 - -
Psa6g0364 218 SUPERFAMILY Homeodomain-like 71 138 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0364 Psa-Chr6 11542514 11544409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0364 1 160 Wox Gene Family AT1G46480 59.563 3.24e-62 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Psa6g0364 Homeodomain 1.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0364 - - aprc:113848075 340.117