Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0333 ATGGCCGACCAAGATAACTCCACGCGCCGCCCTCAACGTGAAGCGAAGAAAAGAGCAGTAGCTGCACTGTGTGAACAGCGGAAACGAAAGCGCGTCGCTCTCGGTGACATAACCAACGACGTCGTTTCAGAAACTGAGAAACTTGTTTCAGATTCTCACAGTCATACTCAGAAGAAAAAGAAGAGAAACATCGCTAAATCTCCGGTGCCGGAGAAATTGGAAGATCCTCAGTTATGTGAACCCTATGTTTCTGATATTCACGACTACCTTCGTAATTTGGAGGTTGATCCTAGTAAAAGGCCTTTACCTGATTATATACAGAAAGTTCAGAGGGATATTAATGCGAATATGAGGGGTGTTCTTGTGGATTGGTTAGTTGAAGTTGCTGAAGAGTACAAACTTGTTGCTGATACGCTTTATTTCTCTGTTTCTTACATAGATAGAAAATATGAGGAGATTAAGCCACCGGAAGTGGAGGATTTTTGTTACATTACTGATAATACGTACTCTAAGGAAGAGGTTTTGAGTATGGAGGCTGAAATTTTGAAGACTTTGAAATTTGAATTGGGTGGTCCTACAATAAAGACATTTCTAAGGAGATTCATCACTAAAGTTGGTCAAGAGGGGGTTGATGCTTCTGAGTTGCAGTTTGAGTTCCTTTGCTGTTATCTTGCTGAGCTCAGTTTGTTGGATTATAATTGTGTAAAGTTTTTGCCTTCTATGGTGGCTGCATCAGTTGTATTTCTAGCACGTTTCATGCTAAACCCAAAGAGTCGACCTTGGAACTCAGCCATCTGTCAATTCACCAGTTATAAACCTGCTGATTTGAAGGAATGTGTTCTAAACATGCATGACTTGTACCTTGGGAGGAAAGGGGCCACTTTGCAAGCTGTGAGAGACAAATACAAACAACATAAGTTCAAATGTGTGGCAACAACACCCTCTCCTCCAGAGATATCTCTTTCTTTCTTTGAATTTAGAGGAGCAGATCCTTAG 996 0.4127 MADQDNSTRRPQREAKKRAVAALCEQRKRKRVALGDITNDVVSETEKLVSDSHSHTQKKKKRNIAKSPVPEKLEDPQLCEPYVSDIHDYLRNLEVDPSKRPLPDYIQKVQRDINANMRGVLVDWLVEVAEEYKLVADTLYFSVSYIDRKYEEIKPPEVEDFCYITDNTYSKEEVLSMEAEILKTLKFELGGPTIKTFLRRFITKVGQEGVDASELQFEFLCCYLAELSLLDYNCVKFLPSMVAASVVFLARFMLNPKSRPWNSAICQFTSYKPADLKECVLNMHDLYLGRKGATLQAVRDKYKQHKFKCVATTPSPPEISLSFFEFRGADP* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0333 331 Gene3D - 103 148 - -
Psa6g0333 331 SUPERFAMILY Cyclin-like 74 189 IPR036915 -
Psa6g0333 331 Gene3D - 184 321 - -
Psa6g0333 331 MobiDBLite consensus disorder prediction 1 20 - -
Psa6g0333 331 CDD CYCLIN 192 284 IPR013763 -
Psa6g0333 331 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 20 148 - -
Psa6g0333 331 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 149 327 - -
Psa6g0333 331 CDD CYCLIN 117 182 IPR013763 -
Psa6g0333 331 PANTHER CYCLINS 149 327 IPR039361 -
Psa6g0333 331 PANTHER CYCLINS 20 148 IPR039361 -
Psa6g0333 331 Gene3D - 149 183 - -
Psa6g0333 331 SUPERFAMILY Cyclin-like 192 317 IPR036915 -
Psa6g0333 331 MobiDBLite consensus disorder prediction 48 71 - -
Psa6g0333 331 PIRSF Cyclin_A_B_D_E 1 148 IPR039361 -
Psa6g0333 331 PIRSF Cyclin_A_B_D_E 149 323 IPR039361 -
Psa6g0333 331 Pfam Cyclin, C-terminal domain 192 315 IPR004367 -
Psa6g0333 331 Pfam Cyclin, N-terminal domain 149 189 IPR006671 -
Psa6g0333 331 Pfam Cyclin, N-terminal domain 85 148 IPR006671 -
Psa6g0333 331 SMART Cyclin_C_2 192 316 IPR004367 -
Psa6g0333 331 SMART cyclin_7 196 285 IPR013763 -
Psa6g0333 331 SMART cyclin_7 123 183 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0333 Psa-Chr6 10240800 10243202 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0333 1 325 Core Cell Cycle Gene Families AT1G47230 52.617 6.26e-131 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0333 K06627 - gmx:100801988 483.796