Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0293 GAAAGAATAGGGTTTCTGTCTTTTCTGGCCGCTTCATTCGGGTCTTCTACTCTTCCTACCCCACCACCCAATTCTACTGCAATGGATAGTCAAGTGAAGTATGCTAAGGTTGAGCAAATTGTGGGGCGCACTGGTTCAAGGGGACAGGTGACTCAAGTTAGAGTGAGTTTTATGGATGACCCGACCCGTCGCATTATGAGGAATGTGAAAGGACCTGTTAGAGTGGGTGATGTTCTCACTCTATTGGAGTCTGAAAGAGAAGCCAGGAGGTTGCGTTAG 279 0.4767 ERIGFLSFLAASFGSSTLPTPPPNSTAMDSQVKYAKVEQIVGRTGSRGQVTQVRVSFMDDPTRRIMRNVKGPVRVGDVLTLLESEREARRLR* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0293 92 PANTHER 40S RIBOSOMAL PROTEIN S28 28 92 IPR000289 GO:0003735|GO:0005840|GO:0006412
Psa6g0293 92 PANTHER - 28 92 - -
Psa6g0293 92 Gene3D - 25 92 IPR012340 -
Psa6g0293 92 CDD S1_S28E 33 92 IPR000289 GO:0003735|GO:0005840|GO:0006412
Psa6g0293 92 Hamap 30S ribosomal protein S28e [rps28e]. 28 92 IPR000289 GO:0003735|GO:0005840|GO:0006412
Psa6g0293 92 Pfam Ribosomal protein S28e 31 91 IPR000289 GO:0003735|GO:0005840|GO:0006412
Psa6g0293 92 ProSitePatterns Ribosomal protein S28e signature. 83 91 IPR028626 -
Psa6g0293 92 SUPERFAMILY Nucleic acid-binding proteins 28 92 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0293 Psa-Chr6 8850357 8851197 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0293 28 92 Cytoplasmic Ribosomal Protein Gene Family AT5G03850 76.923 7.57e-29 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0293 K02979 - ehx:EMIHUDRAFT_65422 83.1889