Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0260 ATGTTTTTTCTCCTTAAATCTCGAAGCCGCCACGTGATCCCCGAGTTTCGTTCTTGTTACAAAGAGCTTTTCACTTCGTTAGAAAACGAACTTGCTAAAACAGGTAAAGCGAGTTTCGCCGACGCTAATGATCAAGCCGCGTTTAATTTCTTAGCTCGGTCTTTATACGGTTCGAACCCGGTCGACAGCGAACTCGGTTTAGACGGTCCAAAAATGGTTCAGAAATGGGTTTTATTTCAGTTAGGCCCGGTTTTAAAACTCGGTTTACCCAAACTTCTAGAAGATTCCATAATTCACAATTTTCGTTTACCTTCTCGTCTCGTTAAGAAAGATTATCAAAGGCTTTACGATTTCTTCTACTCTTCATCGGGATTCGCGCTTGATGAAGCGGAGCGTTTGGGTGTTTCGCGAGATGAAGCTTGTCATAATCTATTATTCGCAACGTGCTTTAATTCCTTCGGTGGAATTAAGCTGTTTTTCCCAAACGTGATGAAATGGATCGGAAGAAGCGGTGTGAGTTTACATATGAAGTTGGCAAAGGAGATTCGGGAAGCGGTTAGATCTGCCGGCGGGGAGATTACAATGGCGGCAATCGATAATATGCCGTTGATGAAATCGGTTGTTTACGAAGCGTTTCGGATCGATCCACCGGTTCCGTTGCAATTCGGAAGAGCGAAAAGGGACATGGTGATTGAGAATCACGAGAATGGATTTTTGGTGAAGAAGGGTGAATTGTTGTTAGGTTATCAACCTTTTGCTACGAAGGATCGTAAGATTTTTGATAGGGCTGAAGAGTTTGTTGCGGATAGATTCGTCGGTGATGGAGAGAAATTGTTGAAGCATGTGGTTTGGTCTAATGGACCGGAAACGGAGTCACCGAGTTTGGGTAATAAGCAATGTGCTGGGAAAGATTTTGTTACGTTGGTTTCTAGGCTTTTGGTTGTGGAAATTTTTCTTAGGTATGATTCGTTTGAGATTCAAGTTGGGAATTCTGCTTTGGGTTCTTCTATTACTGTAACTTCTCTGAAGAGAGCAAGCTTTTAG 1044 0.4262 MFFLLKSRSRHVIPEFRSCYKELFTSLENELAKTGKASFADANDQAAFNFLARSLYGSNPVDSELGLDGPKMVQKWVLFQLGPVLKLGLPKLLEDSIIHNFRLPSRLVKKDYQRLYDFFYSSSGFALDEAERLGVSRDEACHNLLFATCFNSFGGIKLFFPNVMKWIGRSGVSLHMKLAKEIREAVRSAGGEITMAAIDNMPLMKSVVYEAFRIDPPVPLQFGRAKRDMVIENHENGFLVKKGELLLGYQPFATKDRKIFDRAEEFVADRFVGDGEKLLKHVVWSNGPETESPSLGNKQCAGKDFVTLVSRLLVVEIFLRYDSFEIQVGNSALGSSITVTSLKRASF* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0260 347 PANTHER ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE 2 345 - -
Psa6g0260 347 PANTHER CYTOCHROME P450 26 2 345 - -
Psa6g0260 347 Gene3D Cytochrome P450 1 347 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0260 347 PRINTS E-class P450 group IV signature 201 217 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0260 347 PRINTS E-class P450 group IV signature 238 252 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0260 347 PRINTS E-class P450 group IV signature 254 272 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0260 347 PRINTS E-class P450 group IV signature 300 318 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0260 347 Pfam Cytochrome P450 177 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0260 347 SUPERFAMILY Cytochrome P450 6 329 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0260 Psa-Chr6 7921980 7923530 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0260 7 347 Cytochrome P450 AT5G42650 61.404 6.78e-159 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0260 K01723 - gmx:100037481 550.821