Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0245 ATGAGTACTCCTTCCTTACTTTGCTATCTCCAAATCTTCCTAATCATAATATTCACATATCAAACCAAAGCTGTATACGACGAAATAAACAATTACCACTACTTTTGTGATCAAAGCAACAACAAAGCTAACTTCACAACCAATAGCACCTATCATAAAAACCTCAACACACTTTTAACCACCCTCACTTCCAACACAGACATCAACTACGGTTTCTACAATTTTTCTTTCGGCGAAAACAACAACAGAGTCTATTCAATTGGACTCTGTCGAGGAGATCTTTTACCGAATGATTGTCGCCGATGCCTCAGCGGCTCAAGAACAAATCTCACAAGTATTTGTCCAAATCAAAGAGAAGCAATTTTTTGGTCAGAAGATGAAAGATGCATGTTGCGTTACTCCGACCGGTTAATATTAGGTGTCATGGAAGATGTTCCTATGTTTTATTCAAATAACTTGAATGATTCGGTTGATGTTAATTTGTCTAATGAAGTTGTTACAAGTTTGTTGGATAATTTAACAAGTAGAGCTGTGAAAGGTGATTCTAGGACTAAATATGCCGCTGGAAGTTTACCTGGTCCTAGGTACGAGGTTATATATGGTTTGGTTCAGTGTACACCTGATTTGTCTGAAAATGATTGCAATTCATGTTTGGTTGAGAATCTTCAACAAATTCCAGGTTGTTGTAAAGGTAAGATTGGTGGAAGGGTTGTTAGGCCTAGTTGTAACATGAGATTTGAAACGTCTTATCTTTTTTACGAACCTCGAGCATCACCACCTCCACCACCGCCATCTCCTCCGCCTAACACCACCGGAAAAAGCAATAAGAGTACAACAATTGGCATCGCTGTGGCGGTACCGGTTGCAATTGTTGCTTTGGTCTTCATTTTTCTATGCATCTATTTTAAAAAAAGGAAGTCAAAGAAAAAGTTTGAAGAAGTCAAAGAAGAAGAATATCAAGACGACAAAATTGAAATATTTGAGCCACTACAATTCAACTTCAACACTATATCAAATGCTACAAATGACTTCTTTGTTTCCAATAAACTTGGAGAAGGAGGATTCGGGGTCGTTTACAAAGGAAGGCTTTCCAGTGGACAAGAAATTGCAGCCAAAAGGTTGTCAAGGGATTCTGGACAAGGCGATTCCGAATTTAAAAATGAGGTGCTTTTAGTGGCTAAGCTTCAACACCGTAATTTAGTTAGACTACTCGGATTCTGTCTCGAAGGAAGAGAAAGAGTACTTGTGTATGAGTTTGTACATAATAAAAGTCTCGACTCTTTCATTTTTGATCAAGCTAAGAGAGCACAATTATATTGGGAAATACGCTACAAAATCATTTTAGGTATTGCTCGAGGAATTCTTTATCTCCATGAAGATTCCCGACTACGTATTATTCATCGTGATCTCAAAGCAAGTAACATTCTCTTAGATGAAGAAATGAATCCAAAGATAGCTGATTTTGGAATGGCGAGACTATTTGGCGAGGACCAAACACAGGAAAACACAAACAAAATTGTGGGAACCTATGGATATATGGCTCCTGAATATGCAATGCATGGACAATTTTCAGTAAAATCAGATGTGTTCAGTTTTGGTATATTGATTCTGGAAATTGTAAGTGGTATAAAAAATAGTGGCATTCGTGATGGGGAGAATATAGAGTATCTCTCTAGCTTTGCATGGAGAAATTGGAAGGAGGGGGTGGCAACAAATATCATAGATCCCACATTAAATAATGATTCACGAAATGAAATAATGAGATGCATCCATATTGGATTACTTTGTGTTCAAGAGAATGTAGCAAGCAGGCCAACAATGGCTTCTGTTGTAGTAATGCTTAATAGTCATTCTATCACTCTTCCAATACCTTTGGAGCCTGCATTTCATATGGATGTTCGAAACTTTCAAGATATTAAATCATGGGGTCATAGTTCAATTCAAGAATCTGTCAATGAAACTTCAATTACAGAGTTATATCCTCGCTAA 1989 0.3736 MSTPSLLCYLQIFLIIIFTYQTKAVYDEINNYHYFCDQSNNKANFTTNSTYHKNLNTLLTTLTSNTDINYGFYNFSFGENNNRVYSIGLCRGDLLPNDCRRCLSGSRTNLTSICPNQREAIFWSEDERCMLRYSDRLILGVMEDVPMFYSNNLNDSVDVNLSNEVVTSLLDNLTSRAVKGDSRTKYAAGSLPGPRYEVIYGLVQCTPDLSENDCNSCLVENLQQIPGCCKGKIGGRVVRPSCNMRFETSYLFYEPRASPPPPPPSPPPNTTGKSNKSTTIGIAVAVPVAIVALVFIFLCIYFKKRKSKKKFEEVKEEEYQDDKIEIFEPLQFNFNTISNATNDFFVSNKLGEGGFGVVYKGRLSSGQEIAAKRLSRDSGQGDSEFKNEVLLVAKLQHRNLVRLLGFCLEGRERVLVYEFVHNKSLDSFIFDQAKRAQLYWEIRYKIILGIARGILYLHEDSRLRIIHRDLKASNILLDEEMNPKIADFGMARLFGEDQTQENTNKIVGTYGYMAPEYAMHGQFSVKSDVFSFGILILEIVSGIKNSGIRDGENIEYLSSFAWRNWKEGVATNIIDPTLNNDSRNEIMRCIHIGLLCVQENVASRPTMASVVVMLNSHSITLPIPLEPAFHMDVRNFQDIKSWGHSSIQESVNETSITELYPR* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0245 662 CDD STKc_IRAK 350 615 - -
Psa6g0245 662 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 11 648 - -
Psa6g0245 662 Pfam Protein tyrosine and serine/threonine kinase 347 613 IPR001245 GO:0004672|GO:0006468
Psa6g0245 662 Gene3D - 147 250 IPR038408 -
Psa6g0245 662 Gene3D - 32 137 IPR038408 -
Psa6g0245 662 SMART serkin_6 344 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0245 662 ProSiteProfiles Protein kinase domain profile. 344 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0245 662 ProSiteProfiles Gnk2-homologous domain profile. 144 251 IPR002902 -
Psa6g0245 662 Gene3D Transferase(Phosphotransferase) domain 1 420 621 - -
Psa6g0245 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Psa6g0245 662 ProSiteProfiles Gnk2-homologous domain profile. 33 138 IPR002902 -
Psa6g0245 662 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 648 - -
Psa6g0245 662 Pfam Salt stress response/antifungal 36 135 IPR002902 -
Psa6g0245 662 Pfam Salt stress response/antifungal 165 248 IPR002902 -
Psa6g0245 662 SUPERFAMILY Protein kinase-like (PK-like) 328 647 IPR011009 -
Psa6g0245 662 Gene3D Phosphorylase Kinase; domain 1 303 419 - -
Psa6g0245 662 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0245 Psa-Chr6 7432411 7446884 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0245 12 662 Receptor kinase-like Gene Family AT4G21410 48.382 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa6g0245 PK_Tyr_Ser-Thr 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0245 - - lang:109335396 786.178