Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0244 ATGTCTATTCCTTCCTTACTTTGCTCTCTCCAAATTCTCCTATTCATAATTTTCACATATCAAACCAAAGCTGTATACGACCAAATTAACTCATACCACTACTTTTGTGATCAAAGCAACAACAGAGCTAACTACACAACCAATAGCACCTATCACAAAAACCTCAACACACTCTTAACTACTCTCACTTCCAACACAGATATCAACTACGGTTTCTATAATTTTTCATTCGGCGAAAGCAGCGACAGAGTCTATTCAACTGGACTCTGTCGAGGCGATCTTTTGCCGAATGATTGTCGTAGTTGCCTCAGTGGTTCAAGAGAAAATCTCACACGTAGTTGTCCAAACCAAAGAGAAGCAATTTTTTGGTCCAAAGACGAAAGATGTATGTTGCGTTACTCCGACCAGTTAATATTTGGTATCATGGAGGATGTTCCTAATTTTTCTTCAAATAACTTGGATGATTCCGTTGATGTTAATTTGTCTAATGAAGTTGTTATGAGTTTGTTGAATAATCTAACAAGTAAAGCTGTGAAAGGTGATTCTAGGATTAAATACGCTGCTGGAAGTTTACCCGGTCCTTCTGTCGAGATTATATACGGTTTGGTTCAGTGTGCACCTGATTTGTCTGAAAAGGATTGCAATTCATGTTTGGTTGAGAATCTTCAACAAATTCCAGATTGTTGTAAAGGTAAGATTGGTGGAAGGGTTGTTAGGCCTAGTTGTAACATGAGATTTGAAACATCTTATCTTTTTTATGAAACTCGAGCATCACCGCCGCGGTCTCCTCCGACTAACACCACCGGTAAAAGCAAAAGGAGTACCATTGTTGGCATTGGTGTAGCAATACCAATTGGTGTCGTTGTTTTGGTCTTCATCTTTTTCTGCATCTGTTTAAAAATAAGGAAGTCAAAGAAAAAGTTTGAAGACATTCAAGAAGAAGAAGATCAGGACGGCAAAATTGAAGTTTTAGAGCCATTGCAACTCAACTTCAACACTATATGTAATGCTACAAATGACTTCTTTGATTCTAATAAACTTGGAGAAGGAGGATTCGGGATTGTTTACAAAGGTAGACTTTCTAATGGACAAGAGATTGCTGTCAAGAGATTGTCGGGGGATTCTGGACAAGGGGATTCAGAGTTTAAGAATGAGGTATTTTTAGTGGCTAAACTTCAGCACCGAAATTTGGTTAGATTACTTGGCTTCTGTCTACAAGGGAGAGAAAGAATACTTGTATATGAGTTTGTTCATAACAAAAGTCTTGATTATTTCATTTTTGATCAAACTAAGAAAGCACAATTATATTGGGAAATGCGCTACAAAATCATTTTAGGCATTGCTCGAGGCATTCTTTATCTTCATGAAGATTCTCGACTGCGTATTATTCACCGTGATCTCAAAGCAAGTAATGTTCTCTTAGATGAAGAGATGAATCCAAAAATAGCTGATTTTGGCATGGCAAGACTATTTGGTGTAGACCAAACTCAAGCAAACACGAGAAGAATTGTGGGAACCTATGGATACATGGCCCCTGAGTATGCAATGCATGGACACTTTTCAATGAAGTCAGATGTCTTCAGTTTTGGTATATTACTTCTTGAAATTGTAAGTGGTATAAAAAATCATGGCATTCGTGATGGGGAGTATACAGAGTATCTCTCGAGCTTTGCTTGGAGAAATTGGAAGGATGGGACTGCAACAAATGTCATTGATCCCACATTAAACAATGATTCACAAAATGAAATAGTGAGATGTATCCATATTGGATTACTATGTGTTCAAGAGAATATATCTAACAGGCCAACGATGGCTTCTGTCATAGTAATGCTTAATAGTCATTCTATTACTCTCCCAGTGCCATCAGAACCTGCATTTTATATGGATAGTCGAAACTCTCAAGACATTATATCATGGGGCCATAATTTAGCTCAAGAATCAATCAATGAAGTCTCAAATACAGAGTTATATCCTCGCTAG 1980 0.3753 MSIPSLLCSLQILLFIIFTYQTKAVYDQINSYHYFCDQSNNRANYTTNSTYHKNLNTLLTTLTSNTDINYGFYNFSFGESSDRVYSTGLCRGDLLPNDCRSCLSGSRENLTRSCPNQREAIFWSKDERCMLRYSDQLIFGIMEDVPNFSSNNLDDSVDVNLSNEVVMSLLNNLTSKAVKGDSRIKYAAGSLPGPSVEIIYGLVQCAPDLSEKDCNSCLVENLQQIPDCCKGKIGGRVVRPSCNMRFETSYLFYETRASPPRSPPTNTTGKSKRSTIVGIGVAIPIGVVVLVFIFFCICLKIRKSKKKFEDIQEEEDQDGKIEVLEPLQLNFNTICNATNDFFDSNKLGEGGFGIVYKGRLSNGQEIAVKRLSGDSGQGDSEFKNEVFLVAKLQHRNLVRLLGFCLQGRERILVYEFVHNKSLDYFIFDQTKKAQLYWEMRYKIILGIARGILYLHEDSRLRIIHRDLKASNVLLDEEMNPKIADFGMARLFGVDQTQANTRRIVGTYGYMAPEYAMHGHFSMKSDVFSFGILLLEIVSGIKNHGIRDGEYTEYLSSFAWRNWKDGTATNVIDPTLNNDSQNEIVRCIHIGLLCVQENISNRPTMASVIVMLNSHSITLPVPSEPAFYMDSRNSQDIISWGHNLAQESINEVSNTELYPR* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0244 659 Gene3D Transferase(Phosphotransferase) domain 1 417 618 - -
Psa6g0244 659 CDD STKc_IRAK 347 612 - -
Psa6g0244 659 Pfam Salt stress response/antifungal 166 248 IPR002902 -
Psa6g0244 659 Pfam Salt stress response/antifungal 36 135 IPR002902 -
Psa6g0244 659 SMART serkin_6 341 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0244 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Psa6g0244 659 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 7 643 - -
Psa6g0244 659 Gene3D - 147 250 IPR038408 -
Psa6g0244 659 Gene3D - 32 137 IPR038408 -
Psa6g0244 659 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Psa6g0244 659 SUPERFAMILY Protein kinase-like (PK-like) 326 611 IPR011009 -
Psa6g0244 659 Gene3D Phosphorylase Kinase; domain 1 301 416 - -
Psa6g0244 659 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 643 - -
Psa6g0244 659 ProSiteProfiles Gnk2-homologous domain profile. 33 138 IPR002902 -
Psa6g0244 659 Pfam Protein tyrosine and serine/threonine kinase 345 609 IPR001245 GO:0004672|GO:0006468
Psa6g0244 659 ProSiteProfiles Gnk2-homologous domain profile. 144 251 IPR002902 -
Psa6g0244 659 ProSiteProfiles Protein kinase domain profile. 341 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0244 Psa-Chr6 7367862 7371765 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0244 12 659 Receptor kinase-like Gene Family AT4G21410 48.763 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa6g0244 PK_Tyr_Ser-Thr 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0244 - - var:108324787 780.015