Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0243 ATGTTTATTCCTTCCTTACTTTGCTCTCTGCAAATTTTCCTAATCATAACTTTCATATCTCAAACCACAGCTGTTGTTGTATATACAAACAATTACCACTATGCTTGTGATCAAAGTAACAACAAAGCTAACTACACAACCAATAGCACCTATCACAAAAACCTCAACACACTTTTAACCACCCTCACTTCCAACACAGACATCAACTACGGTTTCTACAATTTTTCATTTGGTGAAAACAACGACAGAGTCTATTCAATTGGACTCTGTCGAGGAGATCTTTTGCCGAATGATTGTCGCCGATGCCTCAGCGGCTCAAGAACAAATCTCACAAGTATTTGTCCAAATCAAAGAGAAGCAGTTTTTTGGTCTGAAAACGAAAGATGTATGTTGCGTTACTCCGACCGATTAATATTAGGTGTCATGGAAGATGCTCCTTATTTTTCTTCAAATAACTTGGATGATTCAGTTGATGTTAGTTTGTCTGATGAAGTTGTTACGACTTTGTTGAATAATTTAACAAGTAGAGCTGTGAAAGGTGATTCTAGGATTAAATATGCTGTTGGAAGTTTACCTGGTCCTCAGTACGAGGTTATATATGGTTTGGTTCAGTGTACACCTGATTTGTCTGAAAATGATTGCAATTCATGTTTGGCTGAGAATCTTCAACAAATTCCAAGTTGTTGTAAAGGTAAGATTGGTGGAAGAGTTGTTAGGCCTAGTTGTAATATGAGATTTGAAACATCTTCTCTTTTTTATGAACCTCGAGCATCACCGCCACTGCCACCGCCGTCGCCACTGTCTCCTCCACCCAACACCACCGGAAAAAGCAATAACAGTAATACCATTGGCATCGCTGTAGCAGTACCAGTTGCTATTGTTGCTTTGGTTTTCATTTTTCTATGCATCTATTTTAGAAAAAGGAAGTCACAGAAAAAGTTTGAAGAAATTCAAAAAGAAGATGAAGACGACAAAATTGAAATATCTGAGTCACTGCAATTCGACTTCAACACCATATGTAATGCTACCAATGATTTCTTTGTTTCTAATAAACTTGGAGAAGGAGGATTCGGGGTTGTTTACAAGGGTCAGCTTTCCAATGGACAAGAGATTGCTGTCAAAAGGTTATCAAGAGATTCTGGACAAGGCGATTCGGAGTTTAAAAATGAGGTGCTTTTAGTGGCTAGACTTCAACATCGTAATTTAGTTAGACTACTTGGCTTCTGCCTAGAAGGAAGAGAAAGATTACTTATATATGAGTTTGTTCTTAACAAAAGTCTCGATTACTTCATTTTTGATCAAGCTAAGAGAGGACAATTATATTGGGAAATGCGTTACAAAATCATCTTAGGTATTGCTCGAGGAATTCTTTATCTCCATGAAGATTCTCGACTACGTATTATTCATCGTGACCTCAAAGCAAGTAACATTCTCTTAGATGAAGAGATGAATCCAAAGATAGCTGATTTTGGAATGGCGAGACTATTTGGCGAGGACCAAACACAGGAAAACACAAACAAAATTGTGGGAACCTATGGATATATGGCTCCTGAATATGTAATGCATGGACAGTTTTCAGTAAAATCAGATGTGTTCAGTTTTGGAATATTGATTCTTGAAATTGTAAGTGGTATAAAAAATAGTGGCGTTCGCGATGGGGAGAATACAGAGTATCTCTCTAGCTTTGCATGGAGAAATTGGAAGGAGGGGATGGCAACAAATATCATAGACCCCGCATTAAATAATGATTCACGAAATGAAATAATGAGATGCATCCATATTGGATTACTTTGTGTTCAAGAGAATGTAGCAAGCAGGCCAACAATGAATTCTGTTGTAGTAATGCTTAACAGTCATTCTATCACTCTTCCTATGCCTTTAGAACCTGCATTTCATATGGATGTTCGAAACCTTCAAGATATTAAATCACGGGGTCATAGTTCGGCTCAAGAATCAATCAATGAAATTTCAAATACAGAATTATATCCTCGTTAG 1995 0.3729 MFIPSLLCSLQIFLIITFISQTTAVVVYTNNYHYACDQSNNKANYTTNSTYHKNLNTLLTTLTSNTDINYGFYNFSFGENNDRVYSIGLCRGDLLPNDCRRCLSGSRTNLTSICPNQREAVFWSENERCMLRYSDRLILGVMEDAPYFSSNNLDDSVDVSLSDEVVTTLLNNLTSRAVKGDSRIKYAVGSLPGPQYEVIYGLVQCTPDLSENDCNSCLAENLQQIPSCCKGKIGGRVVRPSCNMRFETSSLFYEPRASPPLPPPSPLSPPPNTTGKSNNSNTIGIAVAVPVAIVALVFIFLCIYFRKRKSQKKFEEIQKEDEDDKIEISESLQFDFNTICNATNDFFVSNKLGEGGFGVVYKGQLSNGQEIAVKRLSRDSGQGDSEFKNEVLLVARLQHRNLVRLLGFCLEGRERLLIYEFVLNKSLDYFIFDQAKRGQLYWEMRYKIILGIARGILYLHEDSRLRIIHRDLKASNILLDEEMNPKIADFGMARLFGEDQTQENTNKIVGTYGYMAPEYVMHGQFSVKSDVFSFGILILEIVSGIKNSGVRDGENTEYLSSFAWRNWKEGMATNIIDPALNNDSRNEIMRCIHIGLLCVQENVASRPTMNSVVVMLNSHSITLPMPLEPAFHMDVRNLQDIKSRGHSSAQESINEISNTELYPR* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0243 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Psa6g0243 664 Pfam Salt stress response/antifungal 165 248 IPR002902 -
Psa6g0243 664 Pfam Salt stress response/antifungal 36 135 IPR002902 -
Psa6g0243 664 Gene3D Transferase(Phosphotransferase) domain 1 423 623 - -
Psa6g0243 664 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Psa6g0243 664 Gene3D - 147 250 IPR038408 -
Psa6g0243 664 Gene3D - 32 137 IPR038408 -
Psa6g0243 664 SMART serkin_6 346 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0243 664 MobiDBLite consensus disorder prediction 256 271 - -
Psa6g0243 664 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 649 - -
Psa6g0243 664 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 11 649 - -
Psa6g0243 664 ProSiteProfiles Gnk2-homologous domain profile. 144 251 IPR002902 -
Psa6g0243 664 Gene3D Phosphorylase Kinase; domain 1 306 421 - -
Psa6g0243 664 CDD STKc_IRAK 352 617 - -
Psa6g0243 664 Pfam Protein tyrosine and serine/threonine kinase 349 615 IPR001245 GO:0004672|GO:0006468
Psa6g0243 664 MobiDBLite consensus disorder prediction 642 664 - -
Psa6g0243 664 ProSiteProfiles Gnk2-homologous domain profile. 33 138 IPR002902 -
Psa6g0243 664 MobiDBLite consensus disorder prediction 255 276 - -
Psa6g0243 664 ProSiteProfiles Protein kinase domain profile. 346 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0243 664 SUPERFAMILY Protein kinase-like (PK-like) 331 644 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0243 Psa-Chr6 7328508 7338534 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0243 41 664 Receptor kinase-like Gene Family AT4G21410 49.616 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa6g0243 PK_Tyr_Ser-Thr 4.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0243 - - gmx:113000774 775.393