Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0241 ATGGTTACGAAGATGCCAGTTGGAAACATAGAGCGTTCAATCAAAAATAATTTAACGATCAAACTCACAACACTCAATGCATGCGAAATCAATATTCACACACACGATCCAAACCCAAACCTGAACTCAATGCTAAGAGGCGAAATCGTCGGTTCCAAAAGTGCGAGGCACACCGCCACCTCCGCCACCGTATCTAATAAAGTTCTGGTGGCGGTTAAAGCGGACAAGGTGATCTCCAACACCGCATTAGCATGGGCGCTCACTCACATCGTTCATTCCAGTGACTCAATCACACTTCTCGCCGTCTATTCTACTGAAAAAACCGGAAGAAAATTCTGGAATTTCTCGAGACTTGCCGGAGATTGTTCGAACGGACGCGCGGGAAAATCGCCGGAGCAGATTTCTGATATCTCCGAGTCTTGTGCTCAGATGGTTTTTCAGTTGCACAATCACATTGAGGTTAGGGTGAAGATTAAGGTTGTCACGGGATCTCCCAGTGGTGCTGTGGCGGCTGAAGCTAGATGGAGTGGTTCACATTGGGTCATACTGGACAAGAAACTAAAGCAAGAGGTAAAGCATTGCATGGATGAACTTAACTGTAGCATTGTGATGATGAATGGATCACAGCCTAAAGTCCTCAGACTTAATTTAGGAGGACCCTCCGATGAACTCCAAACACCATTTTTCTCTACTTCATCTTCACCAGGTATAGAAATTGGAAAGCTAAATGGACGCAGATTGAAGCATTCCACCCCAGTGGGTAGTCCTGAAGTAGCTGGCTCTTCTGTTACAACCAATATAGGATTAGATTCAGTGTCAAGCTCAGACTCAATGACTTCTCCTTTCCTGGTCTATAAAGAAAACCCGCTGTATAATGGCCAGGTTCCACACAAAAGAGCAAGCAAACCAATCAACAAGGCAAAAGATTTCAACTTCCAGCCACCGTTGTTCTTTAATTTGGAAAAGGATAGCCCACCCCCTTCAAGGAAACTCCCAGCATCATCTGTGGCTAGTGATAACAACACTGAAATTTGGATCTCTCAGAACCACATTCATAACGAGAAGCTTCAAAGAGCTGAAAACAGAATGATTCAAAGGACTAAATCTCCAAATTCTAAAACTTTACTTGAGACTTTTTTACACTCTGATCAAGAGAAGAGAACAGATGAACTTGAGTTTAACAAAACTCAAAGTGTAAGTTATGTTACCAGATCAAGCATCCGAGATAGCCCTATTCCTTTGGGTAGAAATTCCTCTATACCTCCCCCCTTGTGCTCACACTGTCAGAATATAGCACCTGTATTTGGAAACCCTCCTAGACGGTTTTCTTACAGAGAGATAGAAGAAGCTACGGACATGTTCTCAGATTTAAATTTTTTGGCTGAAGGTGGATTTGGTGTGGTTCACAAAGGAATACTGAAAGATGGCCAGGTTGTTGCAGTTAAACAAATAAAGTTCAGTGGCTCTCAAGCAGATCTTGATTTCAGCCGGGAAGTTCGGGTTTTGAGTTGTGCACAACACAGGAATGTTGTATTGTTGATAGGATTTTGCACAGAAATCAATGCGAGGATATTAGTCTATGAATACATATGTAATGGATCCTTAGACCTCTGCTTACATGGCAACAAGAGTATACCTTTGGACTGGAACTCACGCCTCAAGATTGCAATTGGAGTTGCACGAGGCTTGCGCTATCTCCATGAAGATTGTAGAGTTGGTTGTATCGTGCACAGAGATATTCGCCCCAAAAATATCCTCTTAACCCATGACTTTGAACCTCTGGTGGCTGATTTTGGGCTTGCTAGATGGCAATCAGAATGGAACATAAATACAGAAGATCGTGTTATGGGAACTTCAGGGTACATTGCACCGGAGTATCTTGATGCTGGAATTCTTACATGTAAAGTAGATGTATATGCATTTGGAATTGTTTTATTAGAGTTAATAACTGGTCAAAGAATTCGTGAGTTGGAACAGTTCAATGAACACTCGTATCTTTCTGAATGGTTTCAACCCCTACACATGTTGGACCCCAATCATATCTTACAAAATGTTGGATCTCTCAACCCATGGTTGGATTCTGAAGAGTCACTAGAATTTAATCTTCAATTTCAAGCCATGGCACGGGCCGTAACACTGTGTCTACGTCTGGATCCTGATTCCAGACCCACAATATCAAAGATCCTCAGAGTACTTGAAGGGGGCAATGCAGTTCGTTCTTTGGGTTTAGACATCAATTCAGTTGGTAGCATAAGTGGTCATTTAAGTGGTTTGAGTTCTCATACTCCTCCTAAAGGTAAAATAAGCCATTCTCGTATGTTATCACATTGA 2331 0.4226 MVTKMPVGNIERSIKNNLTIKLTTLNACEINIHTHDPNPNLNSMLRGEIVGSKSARHTATSATVSNKVLVAVKADKVISNTALAWALTHIVHSSDSITLLAVYSTEKTGRKFWNFSRLAGDCSNGRAGKSPEQISDISESCAQMVFQLHNHIEVRVKIKVVTGSPSGAVAAEARWSGSHWVILDKKLKQEVKHCMDELNCSIVMMNGSQPKVLRLNLGGPSDELQTPFFSTSSSPGIEIGKLNGRRLKHSTPVGSPEVAGSSVTTNIGLDSVSSSDSMTSPFLVYKENPLYNGQVPHKRASKPINKAKDFNFQPPLFFNLEKDSPPPSRKLPASSVASDNNTEIWISQNHIHNEKLQRAENRMIQRTKSPNSKTLLETFLHSDQEKRTDELEFNKTQSVSYVTRSSIRDSPIPLGRNSSIPPPLCSHCQNIAPVFGNPPRRFSYREIEEATDMFSDLNFLAEGGFGVVHKGILKDGQVVAVKQIKFSGSQADLDFSREVRVLSCAQHRNVVLLIGFCTEINARILVYEYICNGSLDLCLHGNKSIPLDWNSRLKIAIGVARGLRYLHEDCRVGCIVHRDIRPKNILLTHDFEPLVADFGLARWQSEWNINTEDRVMGTSGYIAPEYLDAGILTCKVDVYAFGIVLLELITGQRIRELEQFNEHSYLSEWFQPLHMLDPNHILQNVGSLNPWLDSEESLEFNLQFQAMARAVTLCLRLDPDSRPTISKILRVLEGGNAVRSLGLDINSVGSISGHLSGLSSHTPPKGKISHSRMLSH* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0241 776 SMART tyrkin_6 454 732 IPR020635 GO:0004713|GO:0006468
Psa6g0241 776 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 62 767 - -
Psa6g0241 776 SUPERFAMILY Protein kinase-like (PK-like) 434 732 IPR011009 -
Psa6g0241 776 Gene3D Transferase(Phosphotransferase) domain 1 530 741 - -
Psa6g0241 776 ProSitePatterns Tyrosine protein kinases specific active-site signature. 575 587 IPR008266 GO:0004672|GO:0006468
Psa6g0241 776 ProSiteProfiles Protein kinase domain profile. 454 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0241 776 Gene3D Phosphorylase Kinase; domain 1 429 529 - -
Psa6g0241 776 CDD USP_Like 67 183 - -
Psa6g0241 776 Gene3D HUPs 50 200 IPR014729 -
Psa6g0241 776 PANTHER OS01G0253100 PROTEIN 62 767 IPR045271 GO:0004714|GO:0006468
Psa6g0241 776 Pfam Protein kinase domain 457 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0241 776 MobiDBLite consensus disorder prediction 756 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0241 Psa-Chr6 7288994 7294677 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0241 384 733 Trihelix Transcription Factor Family AT5G38560 38.904 9.27e-71 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Psa6g0241 Pkinase 1.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0241 - - gmx:100813141 1132.47