Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0225 ATGGCCACCTCTAGTGGAAACTCTAGTGTGTACACAAAATCTCAAAGCTATGGCTCTGAGGAAGATTTGCAAGATTTGAAGCTTTTGATGGATCAAAGAAAGAGGAAGAGAAAACAATCAAACCGCGAATCGGCGAGAAGATCGAGAATGAGGAAGCAGAAGCACATGGATGATTTAATTGTTGAAGTTGAAAGACTAAGAAATGAAAAGAGTGAAATGATTACAAGGACGAACATGTCAACACAACACTTATTGAAAATGGAGGCTGAGAATTGTGTTCTAAGAGCTCAAATGTGTGAACTTAATCAAAGGCTACAATCATTGAATGATATCATCAACATGATGAATGCAACAACAATTTCAGAAGTTAATTATCAGAATAATGATTGTTTTTTAACAATTGCAGATAATTGCTTCATGAATCAAATGAACAACATGTCATATCTTAACCAATTACCAATTATGGCTTCTGCAGATATGTTTATGTGA 489 0.3476 MATSSGNSSVYTKSQSYGSEEDLQDLKLLMDQRKRKRKQSNRESARRSRMRKQKHMDDLIVEVERLRNEKSEMITRTNMSTQHLLKMEAENCVLRAQMCELNQRLQSLNDIINMMNATTISEVNYQNNDCFLTIADNCFMNQMNNMSYLNQLPIMASADMFM* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0225 162 SUPERFAMILY Leucine zipper domain 33 87 IPR046347 GO:0003700|GO:0006355
Psa6g0225 162 MobiDBLite consensus disorder prediction 24 38 - -
Psa6g0225 162 Pfam bZIP transcription factor 33 91 IPR004827 GO:0003700|GO:0006355
Psa6g0225 162 MobiDBLite consensus disorder prediction 1 56 - -
Psa6g0225 162 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 36 51 IPR004827 GO:0003700|GO:0006355
Psa6g0225 162 Gene3D - 31 84 - -
Psa6g0225 162 Coils Coil 23 43 - -
Psa6g0225 162 PANTHER BZIP TRANSCRIPTION FACTOR 1 161 - -
Psa6g0225 162 CDD bZIP_plant_GBF1 34 84 IPR045314 GO:0003700|GO:0006355
Psa6g0225 162 MobiDBLite consensus disorder prediction 1 21 - -
Psa6g0225 162 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 31 94 IPR004827 GO:0003700|GO:0006355
Psa6g0225 162 SMART brlzneu 29 93 IPR004827 GO:0003700|GO:0006355
Psa6g0225 162 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 161 - -
Psa6g0225 162 Coils Coil 49 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0225 Psa-Chr6 7009815 7011623 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0225 29 162 bZIP Transcription Factor Family AT4G34590 52.555 8.85e-39 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa6g0225 bZIP_1 3.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0225 K25786 - gmx:778146 165.622