Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0212 ATGGAAATGAAAATGAAGAGTGGAATAACAGTGAGTGTTGTTATGGTGGTGTTGTTTTTGTTGGTGGAGTTAACAGTGAGTTTGAGTTCAAGAACTGAACGGTTAGCGTTATTGGAGCTTCGGTCATCGTTGGGTATAAGGGGGAAAAATTGGCCTATTAAAAGTGAACCTTGTCGGAACTGGACCGGTGTTGAATGCCGTAACAGTCGAGTTGTTGGTATCAACGTGTCCGGGTTGAAGAGAACTCACAAGGGTCGTCTTATGCCGGATTTTGAAGTGGATTCTCTTATGAATTTCACACTATTGGAGTCTTTCAATGCTTCTGGTTTCATGCTTAATGGGTCTATACCAGATTGGTTTGGTGAGAGACTTAGTGCACTCAGAATGCTTGATTTAAGGTCTTGTTCAATATCTGGTGTGGTTCCTGATTCACTTGGTGGTTTGAGTAGTTTGAAGTTTTTGTTACTTTCAGGGAATAATCTTACTAGTAGAGTCCCTTCAAGTTTAGGGCTCTTATCTAGTCTTTCTATTCTTGATCTCTCTGGGAATTTGTTTTCAGGGTCAATACCTGAATCTTTCTCCAACCTTGGTAACCTTACAAGCCTTGATCTTTCTAATAATTACTTATCTGGGTCTATTCCACCTGAACTCGGTGTCCTTTCAAATCTTCAAATTTTGAACCTTTCTGATAACACCTTCACCGCTTCTGTTCCTACTCGGCTAGGTAATCTTTCAAAGTTGGTTGAGCTTGATCTTAGTATGAATTCTCTTTCTGGGCCATTGCCGCGTAGTTTGTTTTCTTCTAGATTTTTCGCCATTCGAGTTATGATTTTGAGTAGGAATTCAATTGATGGTGATCTTCCTGATGCTATATGGTCAATGCCTGGATTGCACTTATTTGATGTATCAGGTAACAGTCTCACTGGTCCACTGCCGATATTGTCTGGTTCAAATGTTAGCTCAAACGGTGGCGTATTCAATTTATCGAACAATTTGTTCTACGGACCTGTGAATGGTTTGACGAACAGGCTTAAAATGATTGATTTGTCTGGTAATTATTTGGAAGGCGATGTGCAAGATGGTCTTAGTAATGTTACTCTAGCTAGAAATTGCCTAAAGAAGATTTCAAACCAGAGGGATTTGAAAGAATGTAGAATGTTTTATGTTCAGAGAAATGTATCCTTTGATCATGATGATAACCATGAGACGGAAAAGACGAAACGAGTAATATTCATACTGGCAGGTGTATTTGGTGGATTTGGATTTATTGTGCTACTGCTATTGGTCCTGGTGTTGTTTCTAAAACAATGTCATAAGAGTAAAGATATGGAAATTGAAAGAGGGACCACAACTGGGGGGCGTGTTACAGAAGGGGAAACTCCTACACCTAAGGATCCAATTTTTGTATCAGCTGTCGGAGAGTCGTTTACTTTCGAACAAATACTCCATTTTACGGGAAATTTTGATGAAGCAAACTTAATAAAACATGGTCATTCTGGAGTTTTTTTCTTCGGAGTTTTGGACAGTGGAGTAACTGTGGTTGTCAAAAGGGTAGACTTAAGTTTGTTTAAAAGAGAGTCTTACATTGCAGAGCTGGGATTATTAAGCAAGGTTTCACATGCAAGATTGGTTCCAATTTTGGGACAATGCATGGATAATGAGAAGGATAAATGTATAGTTTACAAGTATATGATAAATGAAGATTTGGCTACTTCCTTACATAGAGTCGGTGGTTCGGATGGGAAGTTGCAGTCCCTGGATTGGATCACAAGATTGAAAATCGCAACCGGAGCTGCTGAAGGCCTAGCTTACCTACATGATTGCAGCCCTCCTCTTGTTCACAGAGATATCCGAGGCAGTAGTATACTTCTCGATGATAAGTTTGAAGTGCGGCTTGGAAGTTTAAGTGAGGTTACTGCCCAAGAAGATTTTCATCAGAATGTAGTGTCAAGAGTTTTCAGCAAACCACTATCTTTGAATCAAGGCAATTATGGTAAATCATCTGTGACATGTGCTTATGATGTCTACTGTTTTGGGAAGATTTTACTGGAGCTTGTTACTGGTAATATCGACATCAGCGAATCAGATGATGCAACCACAAAGGATTGGATAGAGCAAACCTTGAATTACATCACCATATTCGATAAAGAACGGTTGGCTAAGATCGTCGACCCGTCTTTGATAGTGGATGAGGACTTATTGGAAGAGGTATGGGCTATGGCAATCGTGGCCAAGTCGTGCCTTAATCCTAAGCCTTCCAAACGACCTCCAATGAAACATGTCCTCAAAGCGCTTGAAAATCCATTGAAGATTGTGAGAGAAGAAAGTTTTAGTTCGGCAAAGTTGAGAACAACTTCATCGAATCGATCGTGGAGCACTGCGTTTTTTGGTAGCTGGAGACACAGTTCATCAGACAGCGGTGCTACTGCTACCAATAGGGAGGGTTCTAGTGGCATTAAACAAACAGGAAGAATAAGTTCTCATGGTAGTGGTGGACATGATCACTCGTCTTCGAATAAAAGGTCATCGAATGAAATTTTCCCGGAACCGTTGGGAATGCAAGACTTGGAGAATGGAGAGTTAAGATGA 2589 0.4036 MEMKMKSGITVSVVMVVLFLLVELTVSLSSRTERLALLELRSSLGIRGKNWPIKSEPCRNWTGVECRNSRVVGINVSGLKRTHKGRLMPDFEVDSLMNFTLLESFNASGFMLNGSIPDWFGERLSALRMLDLRSCSISGVVPDSLGGLSSLKFLLLSGNNLTSRVPSSLGLLSSLSILDLSGNLFSGSIPESFSNLGNLTSLDLSNNYLSGSIPPELGVLSNLQILNLSDNTFTASVPTRLGNLSKLVELDLSMNSLSGPLPRSLFSSRFFAIRVMILSRNSIDGDLPDAIWSMPGLHLFDVSGNSLTGPLPILSGSNVSSNGGVFNLSNNLFYGPVNGLTNRLKMIDLSGNYLEGDVQDGLSNVTLARNCLKKISNQRDLKECRMFYVQRNVSFDHDDNHETEKTKRVIFILAGVFGGFGFIVLLLLVLVLFLKQCHKSKDMEIERGTTTGGRVTEGETPTPKDPIFVSAVGESFTFEQILHFTGNFDEANLIKHGHSGVFFFGVLDSGVTVVVKRVDLSLFKRESYIAELGLLSKVSHARLVPILGQCMDNEKDKCIVYKYMINEDLATSLHRVGGSDGKLQSLDWITRLKIATGAAEGLAYLHDCSPPLVHRDIRGSSILLDDKFEVRLGSLSEVTAQEDFHQNVVSRVFSKPLSLNQGNYGKSSVTCAYDVYCFGKILLELVTGNIDISESDDATTKDWIEQTLNYITIFDKERLAKIVDPSLIVDEDLLEEVWAMAIVAKSCLNPKPSKRPPMKHVLKALENPLKIVREESFSSAKLRTTSSNRSWSTAFFGSWRHSSSDSGATATNREGSSGIKQTGRISSHGSGGHDHSSSNKRSSNEIFPEPLGMQDLENGELR* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0212 862 ProSiteProfiles Protein kinase domain profile. 488 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0212 862 MobiDBLite consensus disorder prediction 803 833 - -
Psa6g0212 862 SUPERFAMILY Protein kinase-like (PK-like) 468 765 IPR011009 -
Psa6g0212 862 Pfam Leucine rich repeat 117 161 IPR001611 GO:0005515
Psa6g0212 862 Gene3D Transferase(Phosphotransferase) domain 1 564 787 - -
Psa6g0212 862 Gene3D Phosphorylase Kinase; domain 1 458 563 - -
Psa6g0212 862 MobiDBLite consensus disorder prediction 803 862 - -
Psa6g0212 862 Pfam Leucine rich repeat N-terminal domain 32 66 IPR013210 -
Psa6g0212 862 Gene3D Ribonuclease Inhibitor 269 409 IPR032675 -
Psa6g0212 862 Gene3D Ribonuclease Inhibitor 189 268 IPR032675 -
Psa6g0212 862 Gene3D Ribonuclease Inhibitor 30 188 IPR032675 -
Psa6g0212 862 ProSiteProfiles Leucine-rich repeat profile. 198 220 IPR001611 GO:0005515
Psa6g0212 862 SMART LRR_typ_2 196 220 IPR003591 -
Psa6g0212 862 SMART LRR_typ_2 124 147 IPR003591 -
Psa6g0212 862 SMART LRR_typ_2 244 268 IPR003591 -
Psa6g0212 862 SMART LRR_typ_2 148 171 IPR003591 -
Psa6g0212 862 SMART LRR_typ_2 172 195 IPR003591 -
Psa6g0212 862 PANTHER RECEPTOR-LIKE PROTEIN 55 13 187 - -
Psa6g0212 862 PANTHER RECEPTOR-LIKE PROTEIN 55 186 807 - -
Psa6g0212 862 Pfam Protein kinase domain 495 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0212 862 PANTHER BNAA07G03560D PROTEIN 186 807 - -
Psa6g0212 862 PANTHER BNAA07G03560D PROTEIN 13 187 - -
Psa6g0212 862 Pfam Leucine Rich Repeat 198 219 IPR001611 GO:0005515
Psa6g0212 862 Pfam Leucine Rich Repeat 175 196 IPR001611 GO:0005515
Psa6g0212 862 SUPERFAMILY L domain-like 37 358 - -
Psa6g0212 862 PRINTS Leucine-rich repeat signature 199 212 - -
Psa6g0212 862 PRINTS Leucine-rich repeat signature 244 257 - -
Psa6g0212 862 ProSiteProfiles cAMP/cGMP binding motif profile. 493 546 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0212 Psa-Chr6 6664619 6669425 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0212 32 656 Miscellaneous Gene Families AT2G16250 46.327 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Psa6g0212 Pkinase 1.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0212 - - cam:101513491 1252.27