Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0197 ATGCTGGCCATTTTAGTTTGGAAGTATCCTTTTAGATCAAATACTACTACATATCCTTATATTCTTGTTCTTGCTGAGCTTGAGTTTCAACCTCTAGTTATGTTGGTCAACACCACTGCTACAATTCCAATCTGTTGTGAAGTCAAGGTGCACCGTTCTATATGCATAGAGCTTCAAGGTTTCATTGATAGAATTTTGCAAATTATTTTATCCATTGAATCTGCGAGACCAAATTGTGCCTTGGCAATTCAAACATTATGCTCTTTGCACTTCACTTTGGATAAAGCCAAGTTCGTTATCAAACACTGTTCCGAGTCCAGTAAACTCTACTTGGCAATAACATCACAGAAGATACTTTCAAGATGTGAAAAGATAAGAATCTCTTTTGAGTTTTACTTGGATCAGATTCAAAATACTGTTCCCATTCAATTAGCTTCTGTGATATGTGCAATACTAGAGGATCTAAGGGATACAAAGTTTTCATTAGAATATGAAGATGGGACTAGGAAAGTTTTACATTCACTACTTGAGAAGGAATTTCCAGATTCAACTTCTAGAGAGAATTCAGAACTTGAAGCTATTCAAATTGTGGCTTTGATGTTGGATATGAAGTCTTCAATCTCTCTCTTAGAAGAGAGAAAGAATCTTAAGAAGCAAATTGAAAAAGTCAAAAACACAAACCAAAAGGAGAAGGAACTTCTAGAATACCTTTTGTATTTGTTGATTAAATATGAGAAATTTATTTGA 747 0.3414 MLAILVWKYPFRSNTTTYPYILVLAELEFQPLVMLVNTTATIPICCEVKVHRSICIELQGFIDRILQIILSIESARPNCALAIQTLCSLHFTLDKAKFVIKHCSESSKLYLAITSQKILSRCEKIRISFEFYLDQIQNTVPIQLASVICAILEDLRDTKFSLEYEDGTRKVLHSLLEKEFPDSTSRENSELEAIQIVALMLDMKSSISLLEERKNLKKQIEKVKNTNQKEKELLEYLLYLLIKYEKFI* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0197 248 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 5 54 248 - -
Psa6g0197 248 Coils Coil 206 233 - -
Psa6g0197 248 PANTHER U BOX DOMAIN-CONTAINING 54 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0197 Psa-Chr6 6256732 6258026 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0197 47 247 U-box Gene Family AT1G24330 39.512 9.41e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0197 - - gmx:100796783 238.039