Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0188 ATGCAGTTGGAGTATTTGGCCGACTATCTAGCAGAGTTATCACTTATAGAGTATGATATGCTTAAGCACACCTCGTCACTAATAGCTGCATCAGCTGCCTTCTTGGCTAAATATATACTACTTCCTAGCGAGAAACCTGGGAATTCCATGCTAAGGCATTATTACACAGGCTATCAAGAATCAGAATTGCGTGAGTGTGTTAAGGGACTGCATCTGTTGTACTGCAATGGCTATCATAATTCACCTTCCATTACTGCTATCAGAGAGAAATACAGTGAGCATAAGTTCAAGTTTGTGGCAAAGAAGTATTGTCCTCCAATCAATACCAGATTTGCTGATAGCATAATGAAGCTTAATTTCTTCAAGATGATTAGTGATTCTTTTGTTCCTGCATTGAAAAGTACAAAGATGGAGTGGTCAAAGCCAATTTGTCAACAAAATTTAGCATCATTTAGCATCTTGTATGTATGGTTATGCGAAAGAGTATTTGAACTAGAAAGGAAGGTTAATGAGAAGCTAAAGGGTTTAAATGCACCTGATGGGAAATATTCCGTTGAAACAAGGCTGCAAACAGGCAAAGGGGGCGGTGCTGCTCAAGAAGGGGATCCCTCTTTGGTCTTGTATACGGTTTATGCAATTGTTGGCAGTGTGGATCCAACCTTAGCCAAAATGCCTGATTATTCTTCTGCCAATAATCAGTCAAGTCTAGTGTCTTTGAACTATGCCAGATGCATTATGCGAATGTTTATAACCTGTCTGCGCCTGCTTAAGGAAGCTCTAGGGGAACGCCAAAGCCGTGTATTTGATATGGTGCTTGCCACCGAAGCTCCTAATGTTTTTGCTGGTGGTTTTGCTCCCAGTAAAGCACCTCGAGCTCAGTTTCAAATGTCTTTTGCTGAAATCCCAGGAGGCGCATATTCTACTGCACATGTCTCTCATATGCTTCCATCCTTTAGGAGACGGTTTCTCAGAGAGTGA 978 0.4151 MQLEYLADYLAELSLIEYDMLKHTSSLIAASAAFLAKYILLPSEKPGNSMLRHYYTGYQESELRECVKGLHLLYCNGYHNSPSITAIREKYSEHKFKFVAKKYCPPINTRFADSIMKLNFFKMISDSFVPALKSTKMEWSKPICQQNLASFSILYVWLCERVFELERKVNEKLKGLNAPDGKYSVETRLQTGKGGGAAQEGDPSLVLYTVYAIVGSVDPTLAKMPDYSSANNQSSLVSLNYARCIMRMFITCLRLLKEALGERQSRVFDMVLATEAPNVFAGGFAPSKAPRAQFQMSFAEIPGGAYSTAHVSHMLPSFRRRFLRE* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0188 325 SUPERFAMILY Cyclin-like 2 106 IPR036915 -
Psa6g0188 325 CDD CYCLIN 1 71 IPR013763 -
Psa6g0188 325 Pfam Cyclin, C-terminal domain 2 101 IPR004367 -
Psa6g0188 325 Gene3D - 1 106 - -
Psa6g0188 325 PANTHER CYCLINS 2 108 IPR039361 -
Psa6g0188 325 SMART Cyclin_C_2 2 105 IPR004367 -
Psa6g0188 325 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 2 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0188 Psa-Chr6 5938973 5940941 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0188 1 107 Core Cell Cycle Gene Families AT1G44110 60.748 4.37e-34 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0188 K06627 - gmx:100781696 150.599