Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0162 ATGCCATCTGACAATGAAACTTCGACGATGAAGATTCGGAGGAAGCCAACATGGAGGGAGAAAGAGAATAACAAAATGAGAGAAAGAAAAAGGAGAGCCATAACAACAAATATATTCAATGGACTTCGAGCTCAGGGGAACTATAATTTGTCAAAAAACTGTGACACCAATGAGGTCCTCAAAGCTCTCTGCAACGAAGCTGGCTGGGAAGTCGAACAAGATGGAACCACCTATCGCAAGGGAAATGGCAAGCCTCCACTATACAATGATGCAGGCACATCCACTAGAGCTATCCCTTTCCCTTACTCACCAAATCCAAGTCTTGTTCCTCCATCTTTTCCAACTCCAACTCCTTCATACCAATTGAATCCTATGTATTTTCCTTCTGTGATGATGTCAAGCAATTCCCCTATGACACCTCCTATCTACTCGCAGATATCAAAAGATGCCAAATCAACTCCAACATGGGATTCCATTTCCAAAGAATCTATGGACTTTTCCAATTACCCTTTTGCTACATCTTCCACCCCAGCTAGCCCCAAACACCAAAATATGCATACCTCAATGAACTTCCAACCTTTTGCACAATCTCCACCCAAGGTGCCAACTACTTCTTCCTTCAAAATATTTGGGGTTCAGGTACAACCTAGGATTGGAAAAGAAAATCATGGTGAGAGGTTCAATGATTTGGAACTCACCCTTGCAATTGGGAAAGGAAGGAATTAG 726 0.4242 MPSDNETSTMKIRRKPTWREKENNKMRERKRRAITTNIFNGLRAQGNYNLSKNCDTNEVLKALCNEAGWEVEQDGTTYRKGNGKPPLYNDAGTSTRAIPFPYSPNPSLVPPSFPTPTPSYQLNPMYFPSVMMSSNSPMTPPIYSQISKDAKSTPTWDSISKESMDFSNYPFATSSTPASPKHQNMHTSMNFQPFAQSPPKVPTTSSFKIFGVQVQPRIGKENHGERFNDLELTLAIGKGRN* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0162 241 MobiDBLite consensus disorder prediction 1 27 - -
Psa6g0162 241 Pfam BES1/BZR1 plant transcription factor, N-terminal 13 136 IPR008540 -
Psa6g0162 241 MobiDBLite consensus disorder prediction 8 27 - -
Psa6g0162 241 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 125 IPR033264 GO:0003700|GO:0006351|GO:0009742
Psa6g0162 241 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 124 189 IPR033264 GO:0003700|GO:0006351|GO:0009742
Psa6g0162 241 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 125 - -
Psa6g0162 241 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 124 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0162 Psa-Chr6 5209719 5212108 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0162 13 240 BZR Transcription Factor Family AT1G75080 39.557 3.24e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Psa6g0162 BES1_N 4.8e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0162 K14503 - gmx:100785743 233.417