Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0141 ATGGAACCAAAGTGGGGAAGCATTCTAACGCCGTCATCCATTTTCTCCGGCTTTGAAGATCTCAAATGGATCACGGAGTTCGATCACGAACTTTTCACGAAGCGGCCAGTTACTGTAGGAGTCGAAACAGAAACCGAATCAGCGAACGACATCGACGTGAAACCGTTTAAAGTGGATCCATTCACCGGCGTCGGCGATGTTTGCTCCGGTAACGTCGCTGATGCCGCCGATTTTCAAAATCTGGATACGGTAACTTCATTTTCAACATGTGGTGAACCGACAAACACTAATACTTTTGTATCCTCCCAAAACCTCACTCCCAAGCAATCTACCATCACTGCAACAATAGATTCTCAATCATCCATTTCTGCTACCGTTACGAGTCCAGTGTCAGCTAATAAACCAAGCAGTAGAGAAAATCAAACCAAAGGAGTAACTACAACGAGTGGTTCCTCACGTGATCCATCTGATGTAGATGATGAAGCAGGTCCTTGTGAACAAAGCACAAACCCTGTCGATATGAAGCGCCTTAGAAGGAAGGTGTCCAACCGCGATTCTGCGAGAAGGTCTAGAAGAAGAAAACAAGCACATTTGGCAGATCTGGAGGTTCAGGTTGAACAACTGAGGCTGGAAAATGCAGGCCTATTTAAACAGCTTACAGATGCCAGTCAACAATTTCGTGATGCTAACACAAATAACCGAGTTCTAAAATCAGATGTTGAAGCTTTGAGGGCTAAGGTGAAGTTAGCCGAGGATATGGTCTCCAGGGGCACTCTCCCCACTTTTAACAACCAGCTTCTCCAAAATCATAGTCAATTGAGCACCACTCCACCACAAATCAACACTAATAATCTCCGCTGCATGGCACATGTTTCGCCCACCATTACCGTCCACGGAAATGATGCTTCATATGGTGTTACTGGACAGAATTCGGTTATTGGACTTGGAGACTTTGATATATCTTGCAGTGATTTCAACAATGGAGTCAATAATGATGCTGTGAGCTCTTTGACTAGCATATGGCAGTGA 1029 0.448 MEPKWGSILTPSSIFSGFEDLKWITEFDHELFTKRPVTVGVETETESANDIDVKPFKVDPFTGVGDVCSGNVADAADFQNLDTVTSFSTCGEPTNTNTFVSSQNLTPKQSTITATIDSQSSISATVTSPVSANKPSSRENQTKGVTTTSGSSRDPSDVDDEAGPCEQSTNPVDMKRLRRKVSNRDSARRSRRRKQAHLADLEVQVEQLRLENAGLFKQLTDASQQFRDANTNNRVLKSDVEALRAKVKLAEDMVSRGTLPTFNNQLLQNHSQLSTTPPQINTNNLRCMAHVSPTITVHGNDASYGVTGQNSVIGLGDFDISCSDFNNGVNNDAVSSLTSIWQ* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0141 342 Pfam bZIP transcription factor 174 222 IPR004827 GO:0003700|GO:0006355
Psa6g0141 342 MobiDBLite consensus disorder prediction 116 196 - -
Psa6g0141 342 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 178 193 IPR004827 GO:0003700|GO:0006355
Psa6g0141 342 MobiDBLite consensus disorder prediction 116 153 - -
Psa6g0141 342 CDD bZIP_plant_GBF1 193 227 IPR045314 GO:0003700|GO:0006355
Psa6g0141 342 Coils Coil 191 253 - -
Psa6g0141 342 PANTHER BASIC LEUCINE ZIPPER 9 62 342 - -
Psa6g0141 342 PANTHER BASIC LEUCINE ZIPPER 63 62 342 - -
Psa6g0141 342 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 173 236 IPR004827 GO:0003700|GO:0006355
Psa6g0141 342 SUPERFAMILY Leucine zipper domain 175 225 IPR046347 GO:0003700|GO:0006355
Psa6g0141 342 SMART brlzneu 171 235 IPR004827 GO:0003700|GO:0006355
Psa6g0141 342 Gene3D - 174 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0141 Psa-Chr6 4114668 4119722 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0141 117 341 bZIP Transcription Factor Family AT5G24800 50.215 9.80e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa6g0141 bZIP_1 8.8e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0141 K25784 - gmx:778193 375.17