Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0138 ATGCCTCGTGGAACTCTTGAAGTGATTCTCATTGGAGCAAAAGGCCTTCATGACACTGATTTTTTCAAGAAAATGGATCCCTATGTGATTCTGACTTATAAAACTCAGGAGCACATAAGCAGTGTAGCCAAAAATGCAGGATCTAATCCTCGTTGGAATGAAAGCTTTCTTTTCACAGTTGCTGACAATGTTGCTGAACTTAATTTGAGGCTAATGGATAAAGATAGATTTACCAGAGATGATTTTCTTGGTGAGACAATAATTCATTTGGGACCAGTTCTTGATGAATATAGTGTGCCAGAAACTTGTTATAATGTTGTGAAGAATCAGAATTACTGTGGAGAAATTCGTTTGGCTCTTACTTTTCATCCAGAGGGTGGGTATTACTGA 390 0.3769 MPRGTLEVILIGAKGLHDTDFFKKMDPYVILTYKTQEHISSVAKNAGSNPRWNESFLFTVADNVAELNLRLMDKDRFTRDDFLGETIIHLGPVLDEYSVPETCYNVVKNQNYCGEIRLALTFHPEGGYY* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0138 129 PANTHER C2 DOMAIN-CONTAINING 1 128 - -
Psa6g0138 129 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 126 IPR035892 -
Psa6g0138 129 Gene3D C2 domain 2 125 IPR035892 -
Psa6g0138 129 PANTHER ELICITOR-RESPONSIVE-LIKE PROTEIN 1 128 - -
Psa6g0138 129 Pfam C2 domain 4 98 IPR000008 -
Psa6g0138 129 SMART C2_3c 5 102 IPR000008 -
Psa6g0138 129 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0138 Psa-Chr6 4089677 4091050 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0138 4 94 C2H2 Transcription Factor Family AT4G21160 34.066 2.82e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0138 - - gmx:100814819 187.963