Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0121 ATGAACCCAGTTCGATCCCGTTTCTTAGCAAAAATGGCGGCAGAAAACACCGGAAAAAACAACCTCGAATCAGGCGGTTTCTGGCCATTTCTCCGCCGTTGGATCCCCACTTCTACCGACCACATCATCAATGCCGAGAAGCGCCTTCTTTCTCTTGTCAAGACTCCTTATGTCCAAGAACAGGTTAATATTGGTTCTGGTCCACCGGATTCCAGAGTGAGCTGGTTTCGTTCATCTAGCAATGAGCCACGGTTTATCAACACTGTTACCTTTGATAGTAAAGAGGATTCTCCTACACTAGTAATGGTTCATGGATATGCTGCATCACAGGGTTTCTTCTTTCGCAATTTTGATGCACTTGCTTCGCGATTTAGAGTTGTTGCTATTGATCAACTTGGTTGGGGTGGATCTAGCAGGCCAGACTTTACATGCAAAAGCACTGAAGAAACTGAGGCCTGGTTCGTTGATTCTTTTGAGGAATGGAGGAAAGCCAAAAACCTAAGCAATTTTATACTTCTTGGGCATTCTTTTGGCGGTTATATAGCTTCCAAATATGCACTTAAGCACCCAGAGCACGTACAGCACTTGGTTTTGGTGGGATCTGCTGGATTTTCATCAGAAACAGAGAGGATTACAAAGTTTTTATCAACATGGAAAGGATCAATCCTGAACCAAATATGGGAATCCAATTTAACACCTCAAACAATTATCAGAGGATTAGGACCTTGGGGTCCTGATTTAGTACACAGGTATACAAGTGCTAGGTTTGTCAAATACTCAACTGGCGAACTGTTGACAGAATCTGAATCGAGATTACTAACAGACTATGTTTATCATACCTTAGCAGCCAAAGCTAGTGGTGAGTTGTGCTTAAAATATATCTTTTCATTTGGAGCATTTGCCAAGTCGCCTCTTCAACACAGTGCCTCAGAGTGGAAAGTGCCTACCACTTTCATCTATGGTTTTAACGACTGGATGAATTACGAAGGGGCCCAAGAAGCTCGCAAACATATGAAGGTTCCATGTGAAATCATCCGGGTTCCACAGGCCGGACATTTTGTGTTCATTGAAAACCCATCCGCCTTCCATTCGGCTGTGTTTTATGCTTGTAGAAGGTTTCTCAGTCCTGATCCCAACAATGAATCCCTTCCTGAAGGGCTAACATCTGCCTAG 1173 0.4348 MNPVRSRFLAKMAAENTGKNNLESGGFWPFLRRWIPTSTDHIINAEKRLLSLVKTPYVQEQVNIGSGPPDSRVSWFRSSSNEPRFINTVTFDSKEDSPTLVMVHGYAASQGFFFRNFDALASRFRVVAIDQLGWGGSSRPDFTCKSTEETEAWFVDSFEEWRKAKNLSNFILLGHSFGGYIASKYALKHPEHVQHLVLVGSAGFSSETERITKFLSTWKGSILNQIWESNLTPQTIIRGLGPWGPDLVHRYTSARFVKYSTGELLTESESRLLTDYVYHTLAAKASGELCLKYIFSFGAFAKSPLQHSASEWKVPTTFIYGFNDWMNYEGAQEARKHMKVPCEIIRVPQAGHFVFIENPSAFHSAVFYACRRFLSPDPNNESLPEGLTSA* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0121 390 PRINTS Epoxide hydrolase signature 123 138 IPR000639 GO:0003824
Psa6g0121 390 PRINTS Epoxide hydrolase signature 172 185 IPR000639 GO:0003824
Psa6g0121 390 PRINTS Epoxide hydrolase signature 186 199 IPR000639 GO:0003824
Psa6g0121 390 PRINTS Epoxide hydrolase signature 314 330 IPR000639 GO:0003824
Psa6g0121 390 PRINTS Epoxide hydrolase signature 347 369 IPR000639 GO:0003824
Psa6g0121 390 Pfam alpha/beta hydrolase fold 98 210 IPR000073 -
Psa6g0121 390 PRINTS Alpha/beta hydrolase fold signature 123 138 IPR000073 -
Psa6g0121 390 PRINTS Alpha/beta hydrolase fold signature 172 185 IPR000073 -
Psa6g0121 390 PRINTS Alpha/beta hydrolase fold signature 186 199 IPR000073 -
Psa6g0121 390 SUPERFAMILY alpha/beta-Hydrolases 87 366 IPR029058 -
Psa6g0121 390 Gene3D alpha/beta hydrolase 84 370 IPR029058 -
Psa6g0121 390 PANTHER RE40534P-RELATED 27 377 - -
Psa6g0121 390 PANTHER BNAA01G13630D PROTEIN 27 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0121 Psa-Chr6 3698968 3703309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0121 74 205 Acyl Lipid Metabolism Gene Families AT1G64670 31.915 8.82e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0121 - - gmx:100789925 703.745