Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0105 ATGAATCTGATATGTTCAACATGCTTTCATGTTTTCCTTCTCTTTGCTGCTACACTAACACTACTATGTCTCCAACATAAGAATACTGCTAGTGCCTTGGGAAATGACACAGACCAGTTGTCATTACTAAGATTCAAAGAAACCATAGTAAAGGACCCTTTTGATATTTTGAAATCTTGGAACACTTCAACTTACTTTTGCAACTGGCATGGAGTCACGTGCAGTCTCAAGCATCAAAGGGTCACTTCTTTGAACCTACAAGGGTATGCCTTACTTGGATTCATACCACCTGAAATTGGAAACCTCACCTTTCTGAGATATGTTAACCTTCAAAACAACAGCTTCTATGGTGAAATCCCACAGGAAATTGGCCATTTGTTCAGGCTGCAGGAGCTGTATCTGACCAACAACACATTAAAGGGTCAAATTCCAACAAACTTGTCTAGTTGTTCAAACCTCAAGAGATTGAGTTTAACAGGAAACAAACTAGTTGGAAAGATACCAAAGGAGCTTGGCTATCTAACTAAGCTAGAAATTCTATCTATTGGCATGAACAATTTGAGTGGTGAAATTCCTGCATCTATAGGAAATCTTTCATCTCTTAGAGTTCTCACTTTAGGAATCAATAATTTGGAGAGAAATGTACCTGAAGAGATAGGCTATCTGAAAAGCTTGACACATATCTCTATTGCATCCAACAAACTATATGGTGTGCTTCCGCTTGCATTATTTAATATGTCATCTCTCACTTTCTTCTCAGCTGGTGTCAACCAATTTAATGGCACTTTACCTGCCAACATGTTTCTCACACTCCCTAATCTCCAACAATTTGGCATTGGTATGAATAAGATCTCGGGCCCTATCCCGATTTCAATATCGAATGCGACACAACTGATGTTATTTAACATCCCTAGGAATAACTTTGTGGGAAAAGTTCCAACTGGAATAGGAAATCTCAAAAACATCTGGTCCATTGCCATGGAATATAATCATCTAGGGAGTAATTCATCCAAGGATTTGGATTTCTTGACATCTTTGACAAATTGCACAAATTTACAAGTGTTGGATTTGAATCTAAACAACTTTGGTGGTTCTTTACCAAACTCTGTAGCTAACTTTTCAGGTCAATTAAATCAGTTTTACATTGGTGGAAACCAGATTATCGGTACTATCCCTTCAGGATTAGGAAATCTCATCAACTTGATTGGCTTTGACTTGGAGTTCAACCTTCTCTCAGGCTCCATTCCAACTTCTTTTGGAAATTTTGAAAAGATACAATCATTGACATTGAATGTAAACAAACTTTCAGGAAAGATTCCATCATCAATTGGCAACCTTACTCAGTTATTTCAACTTGACCTGTCAAACAATATGCTAGAAGGAGGCATTCCTCCTAGTATTGGAAATTGCCAAATGCTACAATACTTGGACATATCAAATAACCACCTTAGTGGAACCATTCCTTGGCAAGTCATTGGTCTTCCTTCTTTGTCATTGTTACTCAACTTATCCCACAATTCATTAAGCGGAAGCCTGCCCTTTGAAATTGCCAACCTGAAAAGCATCAATAAGTTGGATGCTTCTAAAAACTTTCTGTCTGGTGAAATTCCTGCAATAATCGGACAGTGCATAAGTTTGGAATATCTTAACTTACAAGGGAATTTTTTCCAAGGAGCCATGCCTTCATCTTTGGCTTCATTGAAAGGCCTTCAATATTTAGATTTGTCACTGAACAACTTGTCAGGGTCAATTCCAGAAGGTCTAGACAGTCTTCCTGTTCTAAAGTACTTGAACATTTCTTTTAACAGGTTAGATGGTGAAGTACCAACAGAAGGTGTGTTTAGAAATGAAAGTGCAATATCTGTGAAAAACAACACTGACCTTTGTGGTGGTATTACAGGGTTACATCTACAACCATGTGTTGTCAAAGATAAGGCACAAAAAGACCAAAAGGATTGGAAGATAATAGTAATAGCAATTTGTGTGGTTGTTTTTCTTCTTTTGTCATCTTTCTCTATTGCAATCTTTTGGAGTAAAAAAACACACTTGAGAACTTCCAATTTTTCATCAACAATAGATCACCTTCCAAAGGTCTCATACAAAACACTTTATCAAGCAACAAGTGGATTCTCTTCCAACAACTTGATAGGATCTGGTGGTTTTGGAGTTGTATATAAAGGAATTCTTGAGTCAGAAGAAAGAGTTGTTGCTATAAAGGTCTTGAACCTTCAAGTCAAGGGAGCGCACAAGAGTTTCATCGCTGAATGCAATGCACTCAAAAGTATCCGTCATAGGAATCTTGTCAAGATTCTAACATGTTGCTCAAGTATGGATTACAGTGGTAACGAATTCAAAGCTTTAGTTTTTGAATACGTGGAACATGGAAGCTTGGATAAAAGACTGCTTCCCGGCTCCGAAATCGAAGATCAACCAAATTTGAACCTTCTTCAAAGACTAAATATTCTCACAGATGTTGCTTCTGCAGTACACTATCTACACTATGAATCTGAGCAGCCAATCATTCACTGTGATTTAAAGCCAAGCAATATCCTTCTTGATAATGACATGGTTGCTCATGTGAGTGATTTTGGACAAGCAAGACTTCTATGTGCCATCAATGGCATCTCTGATCTACAAACTAGCACAATTGGATTCAATGGAACAATTGGATATGCCCCTCCAGAGTATGGAGTTGGATGTCAAGTTTCAGCAGAGGGTGATGTGTATAGCTTCGGAATCTTTTTACTGGAAATACTAACTGGAAGAAAACCAACAGATGAAATGTTTACAAATGGTATGAATCTGTACTCTTTTGTCAAGGTTTCACTGCCAGATAAAGTGTTAGATATTGTAGACTCAACTCTACTCCCAAGAGAATTGAAACAAACAACAGTATCAACAACAAGAGATCAAAACCTAAGCCACTTGCATCCTAATGATTTGAAGAAGTGCTTACATGAACTTTTTCACATTGGACTTGCTTGTTCAGTGGAGTCGCCGAGAAAGAGAATAAATATGAAAGATGTCATCAGGGAGCTAGATGTAATTAAAATTGCTCTTTCTAGGAAGTAG 3072 0.3763 MNLICSTCFHVFLLFAATLTLLCLQHKNTASALGNDTDQLSLLRFKETIVKDPFDILKSWNTSTYFCNWHGVTCSLKHQRVTSLNLQGYALLGFIPPEIGNLTFLRYVNLQNNSFYGEIPQEIGHLFRLQELYLTNNTLKGQIPTNLSSCSNLKRLSLTGNKLVGKIPKELGYLTKLEILSIGMNNLSGEIPASIGNLSSLRVLTLGINNLERNVPEEIGYLKSLTHISIASNKLYGVLPLALFNMSSLTFFSAGVNQFNGTLPANMFLTLPNLQQFGIGMNKISGPIPISISNATQLMLFNIPRNNFVGKVPTGIGNLKNIWSIAMEYNHLGSNSSKDLDFLTSLTNCTNLQVLDLNLNNFGGSLPNSVANFSGQLNQFYIGGNQIIGTIPSGLGNLINLIGFDLEFNLLSGSIPTSFGNFEKIQSLTLNVNKLSGKIPSSIGNLTQLFQLDLSNNMLEGGIPPSIGNCQMLQYLDISNNHLSGTIPWQVIGLPSLSLLLNLSHNSLSGSLPFEIANLKSINKLDASKNFLSGEIPAIIGQCISLEYLNLQGNFFQGAMPSSLASLKGLQYLDLSLNNLSGSIPEGLDSLPVLKYLNISFNRLDGEVPTEGVFRNESAISVKNNTDLCGGITGLHLQPCVVKDKAQKDQKDWKIIVIAICVVVFLLLSSFSIAIFWSKKTHLRTSNFSSTIDHLPKVSYKTLYQATSGFSSNNLIGSGGFGVVYKGILESEERVVAIKVLNLQVKGAHKSFIAECNALKSIRHRNLVKILTCCSSMDYSGNEFKALVFEYVEHGSLDKRLLPGSEIEDQPNLNLLQRLNILTDVASAVHYLHYESEQPIIHCDLKPSNILLDNDMVAHVSDFGQARLLCAINGISDLQTSTIGFNGTIGYAPPEYGVGCQVSAEGDVYSFGIFLLEILTGRKPTDEMFTNGMNLYSFVKVSLPDKVLDIVDSTLLPRELKQTTVSTTRDQNLSHLHPNDLKKCLHELFHIGLACSVESPRKRINMKDVIRELDVIKIALSRK* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0105 1023 Pfam Protein kinase domain 712 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0105 1023 Gene3D Ribonuclease Inhibitor 32 93 IPR032675 -
Psa6g0105 1023 Gene3D Ribonuclease Inhibitor 346 649 IPR032675 -
Psa6g0105 1023 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Psa6g0105 1023 SMART serkin_6 710 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0105 1023 SMART LRR_typ_2 591 616 IPR003591 -
Psa6g0105 1023 SMART LRR_typ_2 567 590 IPR003591 -
Psa6g0105 1023 SMART LRR_typ_2 198 222 IPR003591 -
Psa6g0105 1023 SMART LRR_typ_2 126 150 IPR003591 -
Psa6g0105 1023 SMART LRR_typ_2 446 470 IPR003591 -
Psa6g0105 1023 Pfam Leucine Rich Repeat 473 489 IPR001611 GO:0005515
Psa6g0105 1023 PANTHER OS04G0122200 PROTEIN 23 1018 - -
Psa6g0105 1023 SUPERFAMILY L domain-like 37 332 - -
Psa6g0105 1023 ProSitePatterns Protein kinases ATP-binding region signature. 716 739 IPR017441 GO:0005524
Psa6g0105 1023 Gene3D Phosphorylase Kinase; domain 1 672 791 - -
Psa6g0105 1023 PANTHER LRR RECEPTOR-LIKE KINASE 23 1018 - -
Psa6g0105 1023 ProSitePatterns Serine/Threonine protein kinases active-site signature. 840 852 IPR008271 GO:0004672|GO:0006468
Psa6g0105 1023 ProSiteProfiles Leucine-rich repeat profile. 569 592 IPR001611 GO:0005515
Psa6g0105 1023 SUPERFAMILY Protein kinase-like (PK-like) 684 1014 IPR011009 -
Psa6g0105 1023 SUPERFAMILY L domain-like 376 630 - -
Psa6g0105 1023 Gene3D Transferase(Phosphotransferase) domain 1 792 1022 - -
Psa6g0105 1023 Gene3D Ribonuclease Inhibitor 94 345 IPR032675 -
Psa6g0105 1023 PRINTS Leucine-rich repeat signature 473 486 - -
Psa6g0105 1023 PRINTS Leucine-rich repeat signature 567 580 - -
Psa6g0105 1023 Pfam Leucine rich repeat 545 604 IPR001611 GO:0005515
Psa6g0105 1023 ProSiteProfiles Protein kinase domain profile. 710 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0105 Psa-Chr6 3319014 3322358 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0105 35 1017 Receptor kinase-like Gene Family AT3G47570 46.586 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Psa6g0105 Pkinase 5.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0105 - - qsu:112010890 1119.76