Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0096 ATGGATGACAAGATAGACACCGCAGAAAAGAAGGTGCTGGTTGATATTGTAAAATTGGTACAGCGCAAAGGCATGAAGGGTAAACTCGGTGGCTGGAAAGACTTCTTGGACACTAAAGATAAGAAATTTGGCTCATGTATGAGTGATCCATCAAAGAGGTCCCATGAAGTTTTGGCTGATTTTCTCAAGACATTCTCAACTGATGAGGATTTAAGGTATATTGGTAACATCATGCGACAGCATTCTAATCAATACACCATGGAGCGACTGAAAGATAGATCTTATGATTCCCCTGAACAGAGTCTAGTCCAAGCAACTATTCAGCACCCGCGGTACACAAAGGAATATTCATTGCCATGTTTTGACGAGGGATGGTTAGTGATAGACATTAAAAAGAAGTCCAAGGGGATAAAATCCACTACAATGCTTGCTGTTGATTGTGAAATGGTTCTTTGTGAAGATGGGACTGACGCTGTAGTCAAAGTTTGTGTTGTAGATCACAATTTAGAGGTCAAACTACACGAACTTGTTAAACCGGAGAAAGCAATCACAGACTACAGAACAACGATTACTGGTGTCTCTTCTAAGGATCTAGAGACAGTGACTCGCTCCTTAGCTGATATACAAAAATCAATGAAGAAGTTGTTATCCAGTGGAGCCATATTAGTGGGACACAGTTTACATAATGATCTATCCGTACTGAAGATAGATTATCCTAGAGTGGTCGACACTGCATACATCTTCCAACCCATGGATGGATCTACTAACTGGAGACCTTCTTTAAATAATTTGTGTCAGGCTGTGTTAGGCCATGGAGTTCGGGAAGAGGGTGCTTCACATGATTGTCAAGACGATGCATGTGCAACAATGAAACTTGTTCTTGCAAAGATTAAACATGGTGTTGATAAGCCATTCCCGTTATCATTGGTTCAAGAGCCTGTTTCAGAGAGTGAGATGTCGAAGCTGCTTATTCACAGAATACCAACCTTTGTGAACAGTGAAACACTACACGAAATTGTTCCCGGAGACTTCACAATAGAACCAAAGCCTGCCAGGAGTGGTAAAAGTGGTAAAAGTGACACGTATTCGGCCACAGCTATCTTTAAGAACCAACGAGAGGCACATGAGGCATATGAAAATCTTCAAGGCAGCCAAACAGCGGATACAAGTGGGCGTCCGCAGAAACTTGTAACATGTCACTTGAGTACGGGCAATGTCAATGTATATGTTCGGAAAATGGAATTTGATAATCACAACAAAAAGAGAGATTTACAAGAGGACGAGACACTTGACGCATCCAAGAACAAGAAATTAAAAATGGATCCTGAAGTTGAAAAGGATTATGCCCTGAAAGCTTTACAAGGGAAACATGAAATTGAAAAGAAGGTCCATTTGAAAAAGATTGAAAGTCTGAATCAACGTTTGAAACAAAGTGAATTGGAGCACTTGAAGGAGATTGAAGCACTGAATCAACGATTGAAAGAAAGTGAATCGGAGATTGAATCATTGAAGGAACAGTTGCGGAATCAACGACCGAAAGAAAGTGAATTGGAGATTGAATCATTGAAGGAGCAATTGAGAAAAAAAGACTTTGAAATCAACACTCTTCATAGAATGGTAGATAACCTTCAAAAAAGGCGAAAACCACCTATAACAAAAGCAGGCATGTGA 1671 0.4022 MDDKIDTAEKKVLVDIVKLVQRKGMKGKLGGWKDFLDTKDKKFGSCMSDPSKRSHEVLADFLKTFSTDEDLRYIGNIMRQHSNQYTMERLKDRSYDSPEQSLVQATIQHPRYTKEYSLPCFDEGWLVIDIKKKSKGIKSTTMLAVDCEMVLCEDGTDAVVKVCVVDHNLEVKLHELVKPEKAITDYRTTITGVSSKDLETVTRSLADIQKSMKKLLSSGAILVGHSLHNDLSVLKIDYPRVVDTAYIFQPMDGSTNWRPSLNNLCQAVLGHGVREEGASHDCQDDACATMKLVLAKIKHGVDKPFPLSLVQEPVSESEMSKLLIHRIPTFVNSETLHEIVPGDFTIEPKPARSGKSGKSDTYSATAIFKNQREAHEAYENLQGSQTADTSGRPQKLVTCHLSTGNVNVYVRKMEFDNHNKKRDLQEDETLDASKNKKLKMDPEVEKDYALKALQGKHEIEKKVHLKKIESLNQRLKQSELEHLKEIEALNQRLKESESEIESLKEQLRNQRPKESELEIESLKEQLRKKDFEINTLHRMVDNLQKRRKPPITKAGM* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0096 556 Coils Coil 461 513 - -
Psa6g0096 556 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 11 437 - -
Psa6g0096 556 CDD REX1_like 143 294 IPR034922 -
Psa6g0096 556 PANTHER SMALL RNA DEGRADING NUCLEASE 2 11 437 - -
Psa6g0096 556 Gene3D - 137 304 IPR036397 GO:0003676
Psa6g0096 556 SMART exoiiiendus 141 302 IPR013520 -
Psa6g0096 556 SUPERFAMILY Ribonuclease H-like 142 298 IPR012337 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0096 138 308 C2H2 Transcription Factor Family AT3G27970 31.579 2.42e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0096 K14570 - gmx:100785565 627.861