Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0095 ATGGTGAAATCTAGCTCCTGTTTAAGACTAATCACATGCGGTGGTGGTGGTGAGAAAGAACAAGATCAACGAGTTGTTTCTGAGGTTAAGGATTCTAATGATAAGCGTGGTTGGAGTTTTCGGAAGAGATCTGCGAGGCATCGCGTGCTTAGCAATACTGTGATAGCAGCAACAGAGACTCCGACTTCGGCAAATAAGGAGATTTCGGAATATTCAAGTGTTAGTTTTCAATCTCCGGCTGAATCTATTGTTGTTGAGAAGATTTGTACAACAGATTTCTGTAATGAGAAGCCTCAGTTATCCTCCAATGCATACTCACAAGTGCCGGAAACAATTGTCACTGAAACTGAGGATAAGGCGGATGTCAATCTACTGGAATCTGCTGTGATAATCATCCAGGCTTCCGTTAGAGGATATTTGGCTCAGAGAGCACTGATAAAGAGTAAGAATGTAGTGAAGTTGCAAGCTGCTGTTCGCGGGCACTTAGTTAGGAGGCATGCTGTAGGAACGTTGCGATGTGTTCAAGCTATTGTTAAAATGCAGCTCCTTGTACGAGCACGGCAAGCTCAGCAGTCACATTCAAATGGCAAAAATGATTACTCAAAAACTTTGGATAATGAGCATCAGACGGCCATATCAAATGCAAAGCACAGTTCTGTGGAAAAGCTTCTCAGCAATAAATTTGCTCGTCAGCTGATGGAATCGACGCCGAAAAACAAATCTATCCATGTCAAATGTAATCCTTCTGAAGGTGACTCTGCTTGGAAATGGTTGGAGAGATGGATGTCTGTTTCGGCAAAAGATTCTGCAGAAAATAAAAAGCCAGTTAGTACGTCAGAACAATTGGATGAAACCCGCGAGAGCACTCGTGTATCTCAATTGGAAACAGATATTCCATCTGAAGTTATTCTTCAGTTAGCTGATTCACCTCTACCATCCGAGGACGAAGAGAAAACCTCTACTTACGATGATACCAACTCATACTTTCAAGCAAGCGCTTCTACATCTTCCCTTATAAAGGATAAGCTGGAAGAGGGTCCTCCTGAAAAGACGGTTACAGATAATGCTAAAGAAGTCTCTTCTGAAATAGATTCTTTCCGAAATGAAATAACAGAATCACACGCAAGTGTCGGACAGGATCCTGGTTCTCAGGATCGAGACGTCGATGGTGAGATAGGTAAGTTAGAGACCGAGGGAAAGAAAACTGCATGTGTATCAAGGAAGTTAAGCAACCCAGCATTTATTGCTGCGCAATCAAAATTTGAAGAGCTGAGTTCAAATGCGAATTCGAGTAGGCCAAGCTATTTGTTCGATCAGGATGTAACGGTTGAATCACAAGCAGATACCGCATATATATCGAAAGAGTTCATCTCATCTGAGAATTCTACACCCTATCCTTCTAGAATCGGTGATCCTGAAAGTGGTACCGTACTCTCTATTTCTTCAACTCTTGATTCACCTGACAGATCAGAGACTTTGGAAAGCGAGCATGATGCCAAAGATTTAGTGGAAGGGATAGTTAATCCTGAAAACAAAGCTGGTCGCAGTGTTGAGGCCGGCACTCCTTCTGCCCCTCTGACTTCTAACTTACCTATCTCTAGTTCGAATCAATTAGAAAATGTTAACGGCTACAGTGGCAATATTGTTGATTCAGTGAACTCCAAAGAGCCTGCTGTTGAGCCTGAGAAAAATGCATCTGACCTGGTTACAGAACAAACCGAGACTGTTCGGCAGGATTTCAAGTTATCTCCAGAAGCTTCACCAGGAAGCTATATGACAATTCCTGAATCTCAAGGAACGCCTTCAAGTCAGGTTTCAGTGAAACCTAAAGAGAATAAAATCAACAAGACTGGATCAAGCAGCAGACGTAGGGTACTGTCTGTCGGAAACAAGTCTCCTGCAAATTCAAACAACGATTCAGGCTCAAGAGTGTCTGTCGGTAACAAGTCTCCTGCAAATGCAAATCCCGATTCAGGATCAAAAGGTAGTAAAGAACAGTTGCCTAAGGATCATCTGAATGGAAAAAGACGCAATTCATTTGGCTCGATAAAACCAGATCACAACGATCAAGAACCTACTAAAGATAATAGCAGTAGTAACAATATATCTGTTCCTCGTTTCATGCAAGCTACACAATCTGCTAGGGCCAAGATAAATGCAAATTCCTCTCCAAGATCAAGTCCAGATGTACACGACCAAGACGTCAGCATTAAGAAGAGACATTCCTTACCCGGCGCAACTGGTAGGCAGGGTTCTCCACGTGTCGAACAGTCAATATCTCCAGCTCAGCAGGGAACAAAGGGAAATAGCTCAACTGAGAGAAAATGGCAGAGGTGA 2337 0.4279 MVKSSSCLRLITCGGGGEKEQDQRVVSEVKDSNDKRGWSFRKRSARHRVLSNTVIAATETPTSANKEISEYSSVSFQSPAESIVVEKICTTDFCNEKPQLSSNAYSQVPETIVTETEDKADVNLLESAVIIIQASVRGYLAQRALIKSKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQLLVRARQAQQSHSNGKNDYSKTLDNEHQTAISNAKHSSVEKLLSNKFARQLMESTPKNKSIHVKCNPSEGDSAWKWLERWMSVSAKDSAENKKPVSTSEQLDETRESTRVSQLETDIPSEVILQLADSPLPSEDEEKTSTYDDTNSYFQASASTSSLIKDKLEEGPPEKTVTDNAKEVSSEIDSFRNEITESHASVGQDPGSQDRDVDGEIGKLETEGKKTACVSRKLSNPAFIAAQSKFEELSSNANSSRPSYLFDQDVTVESQADTAYISKEFISSENSTPYPSRIGDPESGTVLSISSTLDSPDRSETLESEHDAKDLVEGIVNPENKAGRSVEAGTPSAPLTSNLPISSSNQLENVNGYSGNIVDSVNSKEPAVEPEKNASDLVTEQTETVRQDFKLSPEASPGSYMTIPESQGTPSSQVSVKPKENKINKTGSSSRRRVLSVGNKSPANSNNDSGSRVSVGNKSPANANPDSGSKGSKEQLPKDHLNGKRRNSFGSIKPDHNDQEPTKDNSSSNNISVPRFMQATQSARAKINANSSPRSSPDVHDQDVSIKKRHSLPGATGRQGSPRVEQSISPAQQGTKGNSSTERKWQR* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0095 778 MobiDBLite consensus disorder prediction 552 778 - -
Psa6g0095 778 MobiDBLite consensus disorder prediction 590 662 - -
Psa6g0095 778 SMART iq_5 124 146 IPR000048 GO:0005515
Psa6g0095 778 SMART iq_5 147 168 IPR000048 GO:0005515
Psa6g0095 778 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 192 IPR027417 -
Psa6g0095 778 MobiDBLite consensus disorder prediction 663 693 - -
Psa6g0095 778 ProSiteProfiles IQ motif profile. 147 176 IPR000048 GO:0005515
Psa6g0095 778 MobiDBLite consensus disorder prediction 339 358 - -
Psa6g0095 778 MobiDBLite consensus disorder prediction 342 358 - -
Psa6g0095 778 MobiDBLite consensus disorder prediction 273 291 - -
Psa6g0095 778 MobiDBLite consensus disorder prediction 489 505 - -
Psa6g0095 778 MobiDBLite consensus disorder prediction 308 327 - -
Psa6g0095 778 MobiDBLite consensus disorder prediction 694 730 - -
Psa6g0095 778 MobiDBLite consensus disorder prediction 521 535 - -
Psa6g0095 778 MobiDBLite consensus disorder prediction 566 580 - -
Psa6g0095 778 Gene3D - 122 172 - -
Psa6g0095 778 PANTHER IQ-DOMAIN 5-RELATED 1 774 - -
Psa6g0095 778 Pfam IQ calmodulin-binding motif 127 144 IPR000048 GO:0005515
Psa6g0095 778 Pfam IQ calmodulin-binding motif 149 166 IPR000048 GO:0005515
Psa6g0095 778 MobiDBLite consensus disorder prediction 268 294 - -
Psa6g0095 778 ProSiteProfiles IQ motif profile. 125 153 IPR000048 GO:0005515
Psa6g0095 778 MobiDBLite consensus disorder prediction 751 778 - -
Psa6g0095 778 MobiDBLite consensus disorder prediction 455 488 - -
Psa6g0095 778 PANTHER PROTEIN IQ-DOMAIN 32 1 774 - -
Psa6g0095 778 MobiDBLite consensus disorder prediction 455 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0095 Psa-Chr6 2784185 2788325 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0095 115 778 IQD Protein Family AT1G19870 35.795 5.68e-94 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0095 - - cam:101492650 1060.44