Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0094 ATGCAGAATATCTTTATAGCAGGAACAGACACAAGTGCAGCAATAGTGGTTTGGGCTATGACAGCATTGATGAACAATCCAAGAGTGATGAACAAGGTTCAAATGGAAATGAGAAACTTATATGAAGATGATATTGAAAAGCTACCTTATCTTAAATCAGTGGTGAAAGAGACATTAAGACTATTCCCTCCATCACCATTACTATTACCAAGAGAAACATTAGAAAATTGTAACATAGATGGTTATGAGATTAAACCAAAAACTCTAGTATATGTTAATGCATGGGCCATAGCAAGAGATTCTGAGAATTGGGAAGATGCAGAAGAGTTTTATCCTGAAAGATTCTTTATGAGTGGAGTTGATTTTAAAGGGAAGGATTTTGAGTTGATTCCATTTGGAAGTGGAAGAAGAATGTGTCCTGCAATGAACATGGGAGTTGTGACTGTTGAACTTTCACTTGCTAATATTCTTCATTGTTTTGATTGGAAACTACCTTATGAGGAAGAGGTTTTGGATACACAAGTGAAACCAGGAATTACTATGCATAAGAAAATTGATCTTTATCTTGTTCCTAGGAAAAGAAAACCTTAG 591 0.3503 MQNIFIAGTDTSAAIVVWAMTALMNNPRVMNKVQMEMRNLYEDDIEKLPYLKSVVKETLRLFPPSPLLLPRETLENCNIDGYEIKPKTLVYVNAWAIARDSENWEDAEEFYPERFFMSGVDFKGKDFELIPFGSGRRMCPAMNMGVVTVELSLANILHCFDWKLPYEEEVLDTQVKPGITMHKKIDLYLVPRKRKP* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0094 196 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 132 141 IPR017972 GO:0005506|GO:0016705
Psa6g0094 196 PRINTS E-class P450 group I signature 16 42 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0094 196 PRINTS E-class P450 group I signature 52 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0094 196 PRINTS E-class P450 group I signature 93 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0094 196 PRINTS E-class P450 group I signature 129 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0094 196 PRINTS E-class P450 group I signature 139 162 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0094 196 PANTHER CYTOCHROME P450 83B1 2 193 - -
Psa6g0094 196 SUPERFAMILY Cytochrome P450 3 194 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0094 196 Gene3D Cytochrome P450 1 196 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0094 196 Pfam Cytochrome P450 3 184 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0094 196 PRINTS P450 superfamily signature 7 24 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0094 196 PRINTS P450 superfamily signature 53 64 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0094 196 PRINTS P450 superfamily signature 130 139 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa6g0094 196 PANTHER CYTOCHROME P450 71B11-RELATED 2 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0094 Psa-Chr6 2731584 2732624 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0094 1 193 Cytochrome P450 AT3G26330 53.960 6.64e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0094 - - aip:107646223 288.885