Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0093 ATGGAAGCTTTTGATCAAAGAGGTAGTGGTAGTAATAATCAAAAAATTATTCATGCATTTAGTTCTTCTTCATTAGCTTCATCTCCCAAACCCCCAATTCAATTGAATTCTATGCCTATCAATCAAGTTAATCAAATGGGTTTTCCTGAAAATCACAAAAGTTATAGTATTGGTATACCACCCTCACACCCTAATACCAATACCAGTTTATCACCTAAACCTTCATCCGCTTATCCCCAGTTTTTGTCTTCTTCACAACCCCAAACCCATTCTAGGTCTTTGTCTCAGCCCACTTTTCTCTCTCTAGATTCCTTTTCACTGCCTCCATTGAGTCCTTCACTTTATCCTTTAAGTCCCTCCCCTTTTTTGGACTCGGGTTCTAAAGATGTTTCCATGGAGGAAAACTTGGCTGCCTCTCATGCTCCTTCGCCTAACCGTGGTCATGCTGTTCAGCATGGACATTGTCTTCCACCTCGTAAAGGGCATAGACGCTCTAGCAGTGATACGCCTTTAGGGATCTCGGAATTTGTTAACTCTGTCCCTCAGTCGGGGAGTGATCGTCAGAATTTGGTTTCTGGAGGGGAAAAATTTGGTTCTGAGAAGCCAATTCAGTTGGTGTTGAAGGATAGGAGCTGTCTCGATGGATTTGGGAGAGAGAGTTTTAATGCGAGGAAAGAGGACGATGCAGCTGCAATGGATGATTTGTTTAGTGCCTATATGAATTTGGAGAATATGAATAATATGAGTTTTTCTGGTATGGAAGATAGCCGAACTAGTGGTTCAAAGACGGTTGAAAGCAGTGATAATGAAGCTGAGAGTCATGTAAAAGGAATCAGTTCTAAGGGTGCGAGTTCAAGCTGTTCAGATGAGAGGAGGGAAGGAATCAAGAGGAGTTCTAATGGAGATATTGTATCCACTACTCGACATAGGAGAAGTTTCTCATTGGATGGCTCCATTGGAAATTTTCATATTGAAGATGGATCGCCTAAGCTTCCTCCTTTACAAGGTCGAGCTGGTCGACACTCGCCTAGCAATTCAATGGACAGTAGTAAAACAGCGGAAATTGGCATGGAGTTTGGAAATGGTGAGTTCAGCTCCGAGGAGATGAAGAAGATAATGGAAAATGATAAACTTGCTGAAATTGCCCTGTCTGATCCCAAGCGTGCGAAGAGGATTTTGGCCAATCGTCTATCAGCTGCTCGCTCTAAAGAGCGGAAGACGAAATATATTTCTGAATTAGAGCACAAGGTCCAAACTCTTCAGACAGAGACTACTACATTGTCTACTCAGTATACCAAATTACAGATGGATCATGTGGAGCTTAAGAATGAGCATAACGAGTACAAATTGAGGCTTCAATCCTTGGAGCAACAATCCCAACTGAAAGATGCTCTGAACGAGACTTTGGATGCTGAAGTCCGGCGCTTAAGACGCACCGTAGCAGATCTTGGCGGAGAGTCCCTCCTCTCTAGTCTCATGACTCGGCAGCTAGTTATTAACCAGCAAATGCTCCAGTCACAGCAACAGCAGCCAAACCAGCTTAGAAATTATCAACCGCAAAACAGCCAATCTCTGGAAGAAACGCAGACTCAGATGCAGCAGAATATTCAACGCAATCATGAATTCCAAACCCAGCATCAGAATGGCAAAACTACTGCATAA 1662 0.4302 MEAFDQRGSGSNNQKIIHAFSSSSLASSPKPPIQLNSMPINQVNQMGFPENHKSYSIGIPPSHPNTNTSLSPKPSSAYPQFLSSSQPQTHSRSLSQPTFLSLDSFSLPPLSPSLYPLSPSPFLDSGSKDVSMEENLAASHAPSPNRGHAVQHGHCLPPRKGHRRSSSDTPLGISEFVNSVPQSGSDRQNLVSGGEKFGSEKPIQLVLKDRSCLDGFGRESFNARKEDDAAAMDDLFSAYMNLENMNNMSFSGMEDSRTSGSKTVESSDNEAESHVKGISSKGASSSCSDERREGIKRSSNGDIVSTTRHRRSFSLDGSIGNFHIEDGSPKLPPLQGRAGRHSPSNSMDSSKTAEIGMEFGNGEFSSEEMKKIMENDKLAEIALSDPKRAKRILANRLSAARSKERKTKYISELEHKVQTLQTETTTLSTQYTKLQMDHVELKNEHNEYKLRLQSLEQQSQLKDALNETLDAEVRRLRRTVADLGGESLLSSLMTRQLVINQQMLQSQQQQPNQLRNYQPQNSQSLEETQTQMQQNIQRNHEFQTQHQNGKTTA* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0093 553 CDD bZIP_plant_RF2 388 460 IPR044759 GO:0003700|GO:0006355
Psa6g0093 553 MobiDBLite consensus disorder prediction 133 169 - -
Psa6g0093 553 Coils Coil 403 423 - -
Psa6g0093 553 SMART brlzneu 383 447 IPR004827 GO:0003700|GO:0006355
Psa6g0093 553 Gene3D - 386 438 - -
Psa6g0093 553 MobiDBLite consensus disorder prediction 252 309 - -
Psa6g0093 553 MobiDBLite consensus disorder prediction 1 48 - -
Psa6g0093 553 Coils Coil 431 486 - -
Psa6g0093 553 Pfam bZIP transcription factor 387 444 IPR004827 GO:0003700|GO:0006355
Psa6g0093 553 MobiDBLite consensus disorder prediction 509 535 - -
Psa6g0093 553 PANTHER BZIP TRANSCRIPTION FACTOR 69 553 - -
Psa6g0093 553 SUPERFAMILY Leucine zipper domain 387 443 IPR046347 GO:0003700|GO:0006355
Psa6g0093 553 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 69 553 - -
Psa6g0093 553 MobiDBLite consensus disorder prediction 252 266 - -
Psa6g0093 553 MobiDBLite consensus disorder prediction 66 95 - -
Psa6g0093 553 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 385 448 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0093 Psa-Chr6 2727828 2731231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0093 14 505 bZIP Transcription Factor Family AT4G38900 44.382 4.16e-102 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa6g0093 bZIP_1 1.5e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0093 - - gmx:100787636 590.882