Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0091 ATGCCGATTGTTCTTGAAGGAGCACTTTCAGCTTCCTTGGATGCGTTAAGGGAAAAAATTGCTTCTGCTACTAAGCTTGACGCTGAGCTGTTGAAAAGCCTAGATGTAACACTCATGGACCTTCAATATTTACTTCATGATGCTGAGAAGAAGATCACCGATCCTGCGGTCACGGATTGGTTGAACAAGTTGCATGATCTTGTCTATGAAGCTGAAGATTTGTTCGACGAAATCAATACTGAGGATTTAAGGATGTTTCAACTTCGACTATTCCAAGAAGTTTTGAAAAGAAGTTTTTTTAAAAGGTTTAACAGAGATATCAATTCTAAACTGCGAAAGTTAATTGAAAAACTGCAACATTTGAGAAATCGAAATCCTGGATTGAATGTACGTGGTTTCTACCTTGTTTGGAATGTAACTCCTACAAATTCTGTTGTGGGAGATGAATCTGCTATTTATGGCAGAGATGATGAAATAAAGATACTTAAAGAGCTTCTGATGTGGGAGGAGGATGGTGGAAGTAAAATACGAGTGATTTCCATTGTGGGTATGGCAGGATCAGGAAAAACAACATTAGCTAAACTCCTTTACAATGACCATGATGTTAGAGAGAAATTTAACTTGAGAGGTTGGACACATATTCCAGAATTTCGTGATATTTTCACCGTCACTAAAACCATTCTTGAGTCTTTCACATCAAAAAGATATGAGACGGATGACCTCAAGATTCTACAGCTGCAATTGCAACAAACTTTAAGCGATACAAAGTTTTTGCTAGTGTTGGATGATATATCTTCTGCAAGATATGTTGATTGGACTATTCTAAATGATATTTTTAATCTTGGGAATATGGGGAGTAAGATCATCATCACAACTCGAGATGAAAGCTTTGCGCTATCCATGCAAAATCCTCTCTATGTCTACCATTTAAGATCTTTGGAAACTGAAGATATCTGGTTTTTACTAGCAAGACTTGCATTTGTAGGAGGAAACTACCAACAACATTCTAATCTAGAAATGGTTGGTAGAGAAATTGCCAAAGAATGTGGTGGCTTACCATTAGCTGAAGTAGAATTGGGGCGTATTCTTCGACTCAATTTGACACAAAATTATTGGAGTGATGTATTTAACAGTAGTATTTGGGAGTCGCCAAATGGTATGGTACAACAAGCTCTGCTATTGAGGTATCAATATCTTCCAGGTCCTTTAAAAAGATGTTTTGCTTATTGTTCCATTTTTCCAAAGAACTCAATCTTAGAGAAAAAGATGTTGGTTCAGTTATGGATTGCAGAAGGCTTTATACCTTATCCCAAAAGTGACAAAACTTGGGAAGAAGTAGCAGAAGATTACTTTGATGAACTAGTATCTTGGTCTCTGATACATCAATGCTCCAATGATAATGACGGAAGAAACTTTGAAATGCACGACCTCGCCCAAGATTTGGCTATGACAGTTTCATTTCCATATTACATTAGGTTGGAAAAACATAAGCCACATAAAAAGGTGCTACATTTGTCATACAACAGAGCGGAATACAATAAATTTGATGAATTGGATGAATTAAAAGGTCTACGATCATTTTTAGCCATGCCATTGCAAGATTCACCGGTGTCTTATTCAATGCCAAAGAGGATATTTTTTGACTTATTGTCGACAAAGACACACTTACACGTGTTGTCTCTTTCACACTACCAGAATATCACTAAGTTGCCCAACTCTATTGGAAATTTGATATACCTGCGATACTTGAATCTCTCTGGCACTCGGATTAAAAGATTGTCTTCTGAAATGTGCAAGCTTTACAATTGCAGACGTTGTTGCTGTCAAAATGTTTCGAACTCACTGAATTGCCAAGGGACATGGGGAAATTGCGTGAAGGATGTTTGGATTAAAGATCGGAGATCTGGGAAAATATCCTCATCTAAGGGGAAACCTTTCCATTCACAACTTGAAAATGTAACTGACCCATCCCATGCTTTTGAAGCAAATTTGATGTTTAAAAAAGAAATTGACGAGTTGGAACTAGGATGGTCTTACACAGCTCATTCAAACTCACAAATAACAAAGTGTTGTATTGGAACGACTGCGTCGCCGACAAATTTAAGGTCTTATCATCTCCGGATATGGTGGAGACAAATTACCAATTGGTTGGGCGATTCTATATTTGGCAACATGGTGAGATTGAGTATCTCAGAGTGTAAAAAATTGTTCAGGCTACCATCGCTTGGGAAACTAAGCAATCTAAAAGAACTCTTCATAACTCTGCACTTTAACCATATGGACGAGTGGGAGGAATGGGAGCTGATTGGAGGTTCATCTCCAGAGTTTCCTAGCCTAACACACCTCTCATTGGGATTTGTCGAAACTCAATGGAAACATACCATGCACCTTCTTAAGCTTACTTATCTGTCTGTGAAACTTTGTTCTGAACTCAGAGGGATGACGCTCTACAACCTTCCTTCCCTTATTGAACTTGAGTTAACCGAGTGTCCTCTACTGTTTGAGACAACTCCGCTATTTGACAGCCAATTGCCGAGCACTGGTTTTGTGTGCAACTCATATTATGGTCAGACACCACATTCCATGGATTCTGTGAGGTCTTCCATATCTCACTTGTTGCCAAAGGAATCACCTCAACAAAACTCGAAACAAGATGTCGGTAGTGTTGAAAGCCAGTCAATTGATCCAATGAGTACATCAGTCAGCATAATCGTAAGGTCTTCCATATCTGACTTGTTGTCGCCAAAGGAATCACGCCCGCAAAACCCGAAACAAGATGTCGGCAGTGTGGAAAGCCAGTCAATTTCAGCATGGGAGGAAGCAATCTCATTCATAGAAAATGGAATTTCTGATATTGGTGCTGAAAATACCACATTTCCTGCTCTAAAAGCTTACAAAGCTACAAAGGCTGGAGAAAAGGCGTCTCAAGAGATCCTTGACTCGTGGAAGGAAAATGGGTTTTCTAGCCTAATTATTGCTGCACCAGACTTGGATACTTGGACAGTGGTTAGAGACGTCTTACCACTTTTATCTAACTCTGCCCCATTTGCTATTTATCACCAATATCTTCAGCCTCTAGCAACTTGCATGCACAATCTGCAGCTTGAGAAAATGGCCATTGGATTGCAAATAACAGAGCCGTGGCTTCGTGAATTACCAGATCAACTACAAAATAATGTGAATGTTAAGTTAGTGTTAGGAAGCAATCCGCTGTTTAGCTCGAGTACAATGTCAAAAGAGCGAGGATTGTTGCATTGCCGCCTAGATGTTGTGAAAAATAAGCAAGAGTTTTCACATTTTTGTGAATGTGTATGGGTAAAGAGGTTGTTCAAGCATGGAGCTATTTCCGATATGTGTGATTTTCAACTTCTCAGAGCCTTCGAAATCAATATCAAGTCTCCTCCTCAAAAAAGAGTCATTAAAGGGCTTTGGACTCCTCCTTTAGCGAACTGGATCAAAGTCAATATTGATGGCGCCTCAGATGGTGTTCCTAATAAGGCGGCTTGTGGAGGCATTTTTAAGAATAACCTAGTGGGCAACTTTGCATGTTTTTTAGGCACCGGTAATGTTGCCTTTGTAGAGCTTATGAGTGTCATCCTTGCACTGAAGCATGCTTCTTTGAGAAATTGGTCGCATTTGTGGTTAGAAGTAGACTCCAAGTTGGTGGTTGAGGCATTTTCCAATTCATCTCTGGTTCCCTAG 3702 0.3938 MPIVLEGALSASLDALREKIASATKLDAELLKSLDVTLMDLQYLLHDAEKKITDPAVTDWLNKLHDLVYEAEDLFDEINTEDLRMFQLRLFQEVLKRSFFKRFNRDINSKLRKLIEKLQHLRNRNPGLNVRGFYLVWNVTPTNSVVGDESAIYGRDDEIKILKELLMWEEDGGSKIRVISIVGMAGSGKTTLAKLLYNDHDVREKFNLRGWTHIPEFRDIFTVTKTILESFTSKRYETDDLKILQLQLQQTLSDTKFLLVLDDISSARYVDWTILNDIFNLGNMGSKIIITTRDESFALSMQNPLYVYHLRSLETEDIWFLLARLAFVGGNYQQHSNLEMVGREIAKECGGLPLAEVELGRILRLNLTQNYWSDVFNSSIWESPNGMVQQALLLRYQYLPGPLKRCFAYCSIFPKNSILEKKMLVQLWIAEGFIPYPKSDKTWEEVAEDYFDELVSWSLIHQCSNDNDGRNFEMHDLAQDLAMTVSFPYYIRLEKHKPHKKVLHLSYNRAEYNKFDELDELKGLRSFLAMPLQDSPVSYSMPKRIFFDLLSTKTHLHVLSLSHYQNITKLPNSIGNLIYLRYLNLSGTRIKRLSSEMCKLYNCRRCCCQNVSNSLNCQGTWGNCVKDVWIKDRRSGKISSSKGKPFHSQLENVTDPSHAFEANLMFKKEIDELELGWSYTAHSNSQITKCCIGTTASPTNLRSYHLRIWWRQITNWLGDSIFGNMVRLSISECKKLFRLPSLGKLSNLKELFITLHFNHMDEWEEWELIGGSSPEFPSLTHLSLGFVETQWKHTMHLLKLTYLSVKLCSELRGMTLYNLPSLIELELTECPLLFETTPLFDSQLPSTGFVCNSYYGQTPHSMDSVRSSISHLLPKESPQQNSKQDVGSVESQSIDPMSTSVSIIVRSSISDLLSPKESRPQNPKQDVGSVESQSISAWEEAISFIENGISDIGAENTTFPALKAYKATKAGEKASQEILDSWKENGFSSLIIAAPDLDTWTVVRDVLPLLSNSAPFAIYHQYLQPLATCMHNLQLEKMAIGLQITEPWLRELPDQLQNNVNVKLVLGSNPLFSSSTMSKERGLLHCRLDVVKNKQEFSHFCECVWVKRLFKHGAISDMCDFQLLRAFEINIKSPPQKRVIKGLWTPPLANWIKVNIDGASDGVPNKAACGGIFKNNLVGNFACFLGTGNVAFVELMSVILALKHASLRNWSHLWLEVDSKLVVEAFSNSSLVP* 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0091 1233 Gene3D - 137 305 IPR027417 -
Psa6g0091 1233 Gene3D - 7 121 - -
Psa6g0091 1233 Gene3D - 312 394 IPR042197 -
Psa6g0091 1233 CDD RNase_H_like 1154 1233 IPR044730 -
Psa6g0091 1233 PANTHER OS05G0414200 PROTEIN 18 869 - -
Psa6g0091 1233 PANTHER DISEASE RESISTANCE PROTEIN RP 18 869 IPR044974 GO:0006952
Psa6g0091 1233 MobiDBLite consensus disorder prediction 866 894 - -
Psa6g0091 1233 Gene3D Ribonuclease Inhibitor 669 865 IPR032675 -
Psa6g0091 1233 SUPERFAMILY L domain-like 470 846 - -
Psa6g0091 1233 Coils Coil 104 124 - -
Psa6g0091 1233 MobiDBLite consensus disorder prediction 912 932 - -
Psa6g0091 1233 Pfam Rx N-terminal domain 8 85 IPR041118 -
Psa6g0091 1233 Gene3D - 395 484 IPR036388 -
Psa6g0091 1233 PRINTS Disease resistance protein signature 178 193 - -
Psa6g0091 1233 PRINTS Disease resistance protein signature 251 265 - -
Psa6g0091 1233 PRINTS Disease resistance protein signature 349 363 - -
Psa6g0091 1233 PRINTS Disease resistance protein signature 817 833 - -
Psa6g0091 1233 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 410 IPR027417 -
Psa6g0091 1233 Pfam NB-ARC domain 160 377 IPR002182 GO:0043531
Psa6g0091 1233 Gene3D - 1150 1231 IPR036397 GO:0003676
Psa6g0091 1233 SUPERFAMILY Ribonuclease H-like 1150 1228 IPR012337 -
Psa6g0091 1233 Gene3D Ribonuclease Inhibitor 485 626 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0091 Psa-Chr6 2602502 2617973 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0091 176 485 WRKY Transcription Factor Family AT5G45050 24.762 1.23e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0091 - - mtr:MTR_1g037610 764.992