Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0049 ATGGATACAGGAAACAATAATAACAATTTGAGAACAACTGCTCGTTGCAATTTTCCACCTTATGGAAAAGATTTTGAGGGAGGGATTCCAACCGGCAGATTTAGCAATGGAAAAGTTCCATCTGACCTCATAGTTGAAGAATTAGGCATTAAAGAGCTTCTACCAGCCTACTTGGATCCAAATCTCCAACATGATGATTTGCCTACTGGTGTTAACTTTGCTTCAGGTGGTGCTGGATTTGATCCTTTAACATCTCAAACTGCGTCAGCAATATCTTTATCTAGTCAACTAGACTTATTCAAAGAATACATAACAAAATTAAGACTACTTGTTGGAGAGGACAGAACAAACTTCATCTTGTCAAACAGTCTTTTCCTTGTGGCATTTGGTAGTAATGACATTTCCAACACATATTTTTTATCTCGTATTAGACAAGTTCAATATGATTTTTCAGACTATGCTGATCTTATGGTTAACTCAGCTTCTAATTTCTTAAAGGAAATATATGAACTAGGTGCAAGGAGGATTGGAGTATTCAATGTACCACCAATTGGGTGTTTACCATTTCAGAGAACAGCAGCTGGAGGAATAGAAAGAAATATTGTAGTGGAATACAATGAAGCAGTAGAATTATACAACAACAAATTGTCAAAGGAGTTAGCTTCTTTTAATCAGAACTATCCAAATAGTAGGGTTGTTTACATTGATGTCTATAACCCTCTACTTGACATCATATTAAACTCCAAAAAATATGGATATGAAGTGGAAGATAGAGGATGTTGTGGCACAGGCATAATAGAGGTTGTATTCCTATGCAATCGTTTTGCTTCAACTTGTCCCAATGATATGGAGTTTGTATTTTGGGATAGTTTTCATCCAACTCAAAGTGTTTACAAACGCCTCATATATCCTATGCTTCAAAATTGTGTCAAAAATTTTACGTGA 945 0.3545 MDTGNNNNNLRTTARCNFPPYGKDFEGGIPTGRFSNGKVPSDLIVEELGIKELLPAYLDPNLQHDDLPTGVNFASGGAGFDPLTSQTASAISLSSQLDLFKEYITKLRLLVGEDRTNFILSNSLFLVAFGSNDISNTYFLSRIRQVQYDFSDYADLMVNSASNFLKEIYELGARRIGVFNVPPIGCLPFQRTAAGGIERNIVVEYNEAVELYNNKLSKELASFNQNYPNSRVVYIDVYNPLLDIILNSKKYGYEVEDRGCCGTGIIEVVFLCNRFASTCPNDMEFVFWDSFHPTQSVYKRLIYPMLQNCVKNFT* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0049 314 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 311 - -
Psa6g0049 314 PANTHER GDSL ESTERASE/LIPASE EXL3 1 311 - -
Psa6g0049 314 CDD SGNH_plant_lipase_like 2 301 IPR035669 -
Psa6g0049 314 Pfam GDSL-like Lipase/Acylhydrolase 2 301 IPR001087 GO:0016788
Psa6g0049 314 Gene3D SGNH hydrolase 1 309 IPR036514 -
Psa6g0049 314 SUPERFAMILY SGNH hydrolase 121 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0049 Psa-Chr6 1512078 1518357 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0049 1 312 Pollen Coat Proteome AT1G75910 38.486 5.53e-65 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0049 - - mtr:MTR_1g025680 563.148