Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0046 ATGAAGATCCCTTCTTGTCATTCTTTTCTAACATTAATACTTTTCTTAGTTCTTTGGTTTGAAACAAATGCAAAAGTAGAACTTCCAGAAAATGTTTCGATTCCAGCACTGATTGTGTTTGGAGATTCAATTATGGATACAGGAAATAACAACTTTAAAAAAACAATAACTCGATGCGATTTTGCACCTTACGGAAAAGATTTTCCCGAAGGAGTTGCAACTGGTCGATTTAGCAATGGAAAAGCTCCATCTGACATTATAGCTGAAGAATTTGGCATTAAAGAATTTCTACCTCCATATTTAGATCCCAAGCTCAATATTACCGAACTCGCAACTGGTGTGTGTTTTGCTTCGGGTGGTTCTGGGTTTGATTCTTTTACATCAAAATTGTTGAATGCTATACCTTTATCAAGTCAATTGGACTCATTCAAAGAATATATTGAGAAGCTTAAAGCAACTCTTGGAGAAAATAGAACAAATGAAATTTTAGCCAATAGTGTTTTTCTTGTTGTATTTGGCAGCAATGATATTTCCAACACATATTTCTTAACTCATTTGAGAAAAATTAAATATCCTGAATTTTCTGATTATGCTGATCTTTTGGTTAGTATAGCTTCCAACTTGACTAAGGAAATATATCAACTAGGTGCACGAAAGATCGGAATATTCAATGTGCCGCCGCTAGGGTGTGTGCCGTTGCAGAGGACGGTGGCCGGAGGATCCGAAAGAAAATGTATCGAAGAATATAACAATGCAACAATGTTGTTTAATGATAAATTATTGAATGAGATCGATTCGTTAAAAACTAACTTATCAGATAGTAGAGTTGTTTATATGGATGTTTATAGTCCTATACTCGATGCCATTGTGAACGTTGAAAAATATGGGTTTGTTAATGCAGATAAAGGGTGTTGTGGCACTGGAAAATTGGAGGTTGGATTTTTATGCAACCGTTTTGGATCTATATGTTCCAATGTTTCAGATTATGTGTTTTGGGACAGTTTTCATCCCACTGAAATCTTTTACAAAACCCTTGTACCCCCTCTACTAAAAAAATATATCAGCCAATTTTTTTGA 1077 0.3473 MKIPSCHSFLTLILFLVLWFETNAKVELPENVSIPALIVFGDSIMDTGNNNFKKTITRCDFAPYGKDFPEGVATGRFSNGKAPSDIIAEEFGIKEFLPPYLDPKLNITELATGVCFASGGSGFDSFTSKLLNAIPLSSQLDSFKEYIEKLKATLGENRTNEILANSVFLVVFGSNDISNTYFLTHLRKIKYPEFSDYADLLVSIASNLTKEIYQLGARKIGIFNVPPLGCVPLQRTVAGGSERKCIEEYNNATMLFNDKLLNEIDSLKTNLSDSRVVYMDVYSPILDAIVNVEKYGFVNADKGCCGTGKLEVGFLCNRFGSICSNVSDYVFWDSFHPTEIFYKTLVPPLLKKYISQFF* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0046 358 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 15 356 - -
Psa6g0046 358 SUPERFAMILY SGNH hydrolase 37 350 - -
Psa6g0046 358 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 37 48 IPR008265 GO:0006629|GO:0016298
Psa6g0046 358 CDD SGNH_plant_lipase_like 35 353 IPR035669 -
Psa6g0046 358 Pfam GDSL-like Lipase/Acylhydrolase 38 344 IPR001087 GO:0016788
Psa6g0046 358 PANTHER GDSL ESTERASE/LIPASE EXL3 15 356 - -
Psa6g0046 358 Gene3D SGNH hydrolase 23 351 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0046 Psa-Chr6 1405986 1407599 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0046 10 351 Pollen Coat Proteome AT1G75910 40.290 3.60e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0046 - - mtr:MTR_1g025760 545.043