Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0045 ATGAACTTTTCAATGAAGCTCCCTTGTTCTCATTCTCTTGTAACTTTAATTTCCACTATAGTTTTCCACTTGATATTCAATTTAGTTATTTGTTTTGAAACAAATGCAAAAGTAGAACTTCCACCAAATGTTTCAATTCCTGCATTGCTTGTGTTTGGAGATTCTATCATGGATACTGGAAATAATAACTTTAAAAAAACAGTAGCTCGATCCAATTTTGCACCATATGGAATAGATTTTCCTGGAAGGGTTGCAACCGGTCGATTTAGCAATGGAAAGGTTCCATCAGATTTTATAGTTGAAGAATTAGGCATTAAAGAATATCTACCTCCTTACTTGGATCCAAAACTCAACCCTAATGAATTGATCACTGGTGTGTGTTTTGCATCTGGTGGCGCCGGTTTCGATTCCTTGACATCAAAAGCACAGTTTGCTATACCTTTATCAAGCCAGCTAGACTCATTCAAAGAATATATTGGAAAGCTTAAAGCCTTGGTTGGAGAAAATAGAACAAATGACATTTTAGCCAATAGTGCTATCCTTTTGGTATTTGGAAGCAATGACATTTCCAACACATATTTCATATCTAATTTGAGGAAATTTCAATATCCTGAATTCTCTTCATACGCCGATTTTATAGTTAGTATAGCTTCTAATTTCACCAAGGAACTATATGAACTAGGAGCGCGAAGGATAGGAATATTCAATGCGCCGCCGGTGGGGTGTTTGCCTATGCAGAGAACATTGGCCGGAGGGTCTGAGAGAAAATGTGTGGAAAATTACAACAATGCAACAATGTTGTATAATGAAAAGCTATCAAAGGAAATTGATTCTCTTAGTCAGAACTTATCAAATAGTAAAATTATTTATCTTGATGTTTACAATCCAATACTGGATATTATTGTGAACGACCAAAAATATGGGTTTACAAATGCAGACAAAGGGTGTTGTGGCACAGGAAAAGTAGAGGTTGCGTTTTTATGTAACCGTTTTGGATCTGTATGTTCCAACCATTCAGATCATGTTTTTTGGGACAGTTTTCACCCCACAGAAGCCACTTACAAAAATGTTGTAGTCCCCGTAATGAAAACTTTTCTGAGCAAACTTGTGTGA 1113 0.3612 MNFSMKLPCSHSLVTLISTIVFHLIFNLVICFETNAKVELPPNVSIPALLVFGDSIMDTGNNNFKKTVARSNFAPYGIDFPGRVATGRFSNGKVPSDFIVEELGIKEYLPPYLDPKLNPNELITGVCFASGGAGFDSLTSKAQFAIPLSSQLDSFKEYIGKLKALVGENRTNDILANSAILLVFGSNDISNTYFISNLRKFQYPEFSSYADFIVSIASNFTKELYELGARRIGIFNAPPVGCLPMQRTLAGGSERKCVENYNNATMLYNEKLSKEIDSLSQNLSNSKIIYLDVYNPILDIIVNDQKYGFTNADKGCCGTGKVEVAFLCNRFGSVCSNHSDHVFWDSFHPTEATYKNVVVPVMKTFLSKLV* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0045 370 PANTHER GDSL ESTERASE/LIPASE EXL3 14 367 - -
Psa6g0045 370 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 14 367 - -
Psa6g0045 370 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 49 60 IPR008265 GO:0006629|GO:0016298
Psa6g0045 370 Coils Coil 269 289 - -
Psa6g0045 370 SUPERFAMILY SGNH hydrolase 49 365 - -
Psa6g0045 370 Gene3D SGNH hydrolase 38 366 IPR036514 -
Psa6g0045 370 CDD SGNH_plant_lipase_like 47 358 IPR035669 -
Psa6g0045 370 Pfam GDSL-like Lipase/Acylhydrolase 49 357 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0045 Psa-Chr6 1397756 1399428 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0045 43 357 Pollen Coat Proteome AT1G75910 41.325 2.33e-76 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0045 - - mtr:MTR_1g025760 564.303