Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0040 ATGAACTTCCTTGCAGCTGAAGAATTGGGTATCAAGGGGTATGTACCTGCATATTTGGATCCAAATCTCAAATCAACTGATCTTCTTACGGGCGTAGGGTTCGCCTCCGCAGCATCAGGATACGATCCATTGACACCACAAATTGCGTCGGTGATACCGTTATCGACTCAACTAGACATGTTCAAAGAATACATAGGAAAGCTGAAAAACATGGTTGGAGAAGAAAGAACAAACTTCATCCTAACCAATAGTCTTTTTGTTTTGGTGGGAGGTAGTGATGACATTGCCAACACATATTTTATTGCTCATGCAAGATTACAATATGACATTCCTGCTTACACTGATCTTATGTCCAACTCAGCCACTAATTTTGTAAAGGAAATATACAAACTTGGAGCTAGAAGAATTGCTGTACTAGGTGCACCACCAATAGGATGTGTGCCATCACAAAGAACTCTTGCTGGAGGGATAGTAAGAGAATGTGCAGAAAAATATAATGATGCAGCAAAGTTATTCAATCTCAAACTCTCAAAGGAGCTTGATTCTCTAGGTCACAACTCACCTAATAGCAAGATAGTTTACATTGATGCTTACACACCTCTACTTGATATCATTCTCAATTATCAAAAATATGGGTTCAAAGTTGTGGATAGAGGTTGTTGTGGCACAGGGAAACTAGAGGTTGCAGTGCTATGCAATCCTTTTGATACTACTTGTTCTGATGCTTCTGAATATGTGTTTTGGGATAGTTATCATCCTACTGAAGGAGCTTATAGAAAGCTAGTAGATGCGATTCTTCAAGAATCTTTCAGCAGATTGTTATAA 825 0.3891 MNFLAAEELGIKGYVPAYLDPNLKSTDLLTGVGFASAASGYDPLTPQIASVIPLSTQLDMFKEYIGKLKNMVGEERTNFILTNSLFVLVGGSDDIANTYFIAHARLQYDIPAYTDLMSNSATNFVKEIYKLGARRIAVLGAPPIGCVPSQRTLAGGIVRECAEKYNDAAKLFNLKLSKELDSLGHNSPNSKIVYIDAYTPLLDIILNYQKYGFKVVDRGCCGTGKLEVAVLCNPFDTTCSDASEYVFWDSYHPTEGAYRKLVDAILQESFSRLL* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0040 274 Gene3D SGNH hydrolase 2 269 IPR036514 -
Psa6g0040 274 CDD SGNH_plant_lipase_like 6 267 IPR035669 -
Psa6g0040 274 Pfam GDSL-like Lipase/Acylhydrolase 2 265 IPR001087 GO:0016788
Psa6g0040 274 PANTHER GDSL ESTERASE/LIPASE EXL3 4 272 - -
Psa6g0040 274 SUPERFAMILY SGNH hydrolase 84 267 - -
Psa6g0040 274 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 4 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0040 Psa-Chr6 1341429 1343353 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0040 4 268 Pollen Coat Proteome AT1G75910 36.431 2.25e-50 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0040 - - gmx:100775689 444.121